ggKbase home page

L1_008_030G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_122_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2..631
DNA (630bp) protein (210aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Valine--tRNA ligase n=2 Tax=Bacteroides RepID=C6Z636_9BACE
L1_008_030G1_scaffold_122_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(812..1252)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A5H1_BACVU
membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23575.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L1_008_030G1_scaffold_122_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1397..1942
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=3 Tax=Bacteroides RepID=C6Z634_9BACE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
RNA polymerase sigma70 factor
L1_008_030G1_scaffold_122_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1939..2316
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HNX2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82609.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_030G1_scaffold_122_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2390..2839)
DNA (450bp) protein (150aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3G3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66635.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_030G1_scaffold_122_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2910..3902)
DNA (993bp) protein (331aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z631_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66634.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_008_030G1_scaffold_122_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4025..7321)
DNA (3297bp) protein (1099aa)
Protein translocase subunit SecA n=6 Tax=root RepID=SECA_BACV8
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_030G1_scaffold_122_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7417..9000)
DNA (1584bp) protein (528aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=5 Tax=Bacteroides RepID=C6Z629_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82613.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
alkaline phosphatase
L1_008_030G1_scaffold_122_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8997..10172)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3F9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS30490.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_030G1_scaffold_122_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10299..11027
DNA (729bp) protein (243aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Type III pantothenate kinase n=7 Tax=Bacteroides RepID=COAX_BACV8
L1_008_030G1_scaffold_122_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11014..12330
DNA (1317bp) protein (439aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z626_9BACE
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EET16335.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_030G1_scaffold_122_12
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12377..13732
DNA (1356bp) protein (452aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3F6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66628.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_030G1_scaffold_122_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13735..14379
DNA (645bp) protein (215aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3F5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05482.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_030G1_scaffold_122_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14393..15652
DNA (1260bp) protein (420aa)
Transmembrane CBS domain transporter n=3 Tax=Bacteroides RepID=E5UVX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82619.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_030G1_scaffold_122_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15758..17890
DNA (2133bp) protein (711aa)
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bacteroides RepID=A6L3F3_BACV8
Peptidyl-prolyl cis-trans isomerase D {ECO:0000313|EMBL:EOS05480.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptidyl-prolyl cis-trans isomerase
L1_008_030G1_scaffold_122_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18520..19605)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3F2_BACV8
TonB
Uncharacterized protein {ECO:0000313|EMBL:CDF18351.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_030G1_scaffold_122_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19733..20776)
DNA (1044bp) protein (348aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Ketol-acid reductoisomerase n=8 Tax=root RepID=A6L3F1_BACV8
ketol-acid reductoisomerase
L1_008_030G1_scaffold_122_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20811..21554)
DNA (744bp) protein (248aa)
Acyl-ACP thioesterase n=4 Tax=Bacteroides RepID=A6L3F0_BACV8
acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:KDS30499.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_030G1_scaffold_122_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21554..22108)
DNA (555bp) protein (185aa)
Acetohydroxyacid synthase small subunit n=7 Tax=Bacteroides RepID=A6L3E9_BACV8
acetohydroxyacid synthase small subunit
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EOS05476.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_030G1_scaffold_122_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22119..23816)
DNA (1698bp) protein (566aa)
Acetolactate synthase, large subunit, biosynthetic type n=6 Tax=Bacteroides RepID=C6Z617_9BACE
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EIY82625.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
acetolactate synthase large subunit
L1_008_030G1_scaffold_122_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23916..25718)
DNA (1803bp) protein (601aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=3 Tax=Bacteroides RepID=C6Z616_9BACE
L1_008_030G1_scaffold_122_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26129..26503)
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L3E6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05472.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_030G1_scaffold_122_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26866..27444
DNA (579bp) protein (193aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Bacteroides RepID=A6L3E5_BACV8
peptidyl-prolyl cis-trans isomerase
L1_008_030G1_scaffold_122_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27592..29034)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=3 Tax=root RepID=I9A4G2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82630.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_008_030G1_scaffold_122_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29047..32328)
DNA (3282bp) protein (1094aa)
TonB-dependent receptor n=2 Tax=Bacteroides vulgatus RepID=D4VE72_BACVU
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR40207.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_030G1_scaffold_122_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32358..33698)
DNA (1341bp) protein (447aa)
Thioredoxin n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VE71_BACVU
AhpC/TSA family protein {ECO:0000313|EMBL:KDS55464.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
thiol-disulfide isomerase and thioredoxin
L1_008_030G1_scaffold_122_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34056..35324
DNA (1269bp) protein (423aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3E1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66757.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_030G1_scaffold_122_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35321..36088
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=R9HNU2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS05466.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_030G1_scaffold_122_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36054..36857)
DNA (804bp) protein (268aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=4 Tax=Bacteroides RepID=C6Z608_9BACE
L1_008_030G1_scaffold_122_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36862..37536)
DNA (675bp) protein (225aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L3D8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS30512.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Displaying items 1-30 of 51 in total

View Taxonomy