ggKbase home page

L1_008_030G1_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_161_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

170..1948
DNA (1779bp) protein (593aa)
Alpha-1,3-galactosidase B n=2 Tax=Bacteroides vulgatus RepID=GLAB1_BACV8
Putative alpha-1,3-galactosidase B {ECO:0000313|EMBL:EFG17753.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
ATP/GTP-binding site
L1_008_030G1_scaffold_161_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2295..2933
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZN1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04096.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_030G1_scaffold_161_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2980..3090)
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZRE3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18945.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_030G1_scaffold_161_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3111..5150)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9U6S6_BACVU
Alpha-L-fucosidase family protein {ECO:0000313|EMBL:KDS54646.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
alpha-L-fucosidase
L1_008_030G1_scaffold_161_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5159..6061)
DNA (903bp) protein (301aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_00185}; Short=DMAPP:tRNA dimethylallyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_00185};; Short=DMATase 1 {ECO:0000255|HAMAP-Rule:MF_00185};; Isopentenyl-diphosphate:tRNA isopentenyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_00185}; Short=IPP transferase 1 {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPPT 1 {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPTase 1 {ECO:0000255|HAMAP-Rule:MF_00185};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
tRNA dimethylallyltransferase 1 n=3 Tax=Bacteroides vulgatus RepID=MIAA1_BACV8
L1_008_030G1_scaffold_161_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6113..6676)
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KWL6_BACV8
hypothetical protein
Plasmid pRiA4b ORF-3-like family protein {ECO:0000313|EMBL:KDS54644.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_030G1_scaffold_161_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6739..7506)
DNA (768bp) protein (256aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=7 Tax=Bacteroides RepID=A6KWL5_BACV8
L1_008_030G1_scaffold_161_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7523..8908)
DNA (1386bp) protein (462aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=6 Tax=root RepID=C6Z351_9BACE
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
L1_008_030G1_scaffold_161_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8914..9954)
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
UDP-3-O-acylglucosamine N-acyltransferase n=6 Tax=Bacteroides RepID=LPXD_BACV8
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
L1_008_030G1_scaffold_161_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10087..11322)
DNA (1236bp) protein (412aa)
HD domain protein n=4 Tax=root RepID=C6Z349_9BACE
HD domain protein {ECO:0000313|EMBL:EET15308.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
phosphohydrolase
L1_008_030G1_scaffold_161_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11411..12229)
DNA (819bp) protein (273aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Orotidine 5'-phosphate decarboxylase n=15 Tax=Bacteroides RepID=PYRF_BACV8
orotidine 5'-phosphate decarboxylase
L1_008_030G1_scaffold_161_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12266..13381)
DNA (1116bp) protein (372aa)
Peptide chain release factor 1 n=7 Tax=Bacteroides RepID=A6KWL0_BACV8
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_030G1_scaffold_161_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13624..14793)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z345_9BACE
phosphoribosylformylglycinamidine cyclo-ligase
Putative phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:CDF18955.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_030G1_scaffold_161_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16031..16624
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6KWK7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04084.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_030G1_scaffold_161_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16627..17625
DNA (999bp) protein (333aa)
Toxin-antitoxin system, toxin component, Fic family n=4 Tax=Bacteroides RepID=D4V8S7_BACVU
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ABR37820.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_030G1_scaffold_161_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17593..17808)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZQ34_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18958.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_030G1_scaffold_161_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17974..19653)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8S6_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17739.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_008_030G1_scaffold_161_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19732..21162
DNA (1431bp) protein (477aa)
Carbon starvation protein A n=5 Tax=Bacteroides RepID=A6KWK4_BACV8
carbon starvation protein A
Carbon starvation CstA family protein {ECO:0000313|EMBL:KDS54631.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_030G1_scaffold_161_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21149..21370
DNA (222bp) protein (74aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6KWK3_BACV8
membrane protein
Putative membrane protein {ECO:0000313|EMBL:KDS26376.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_030G1_scaffold_161_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21389..21880
DNA (492bp) protein (164aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KWK2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04078.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_030G1_scaffold_161_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21990..24296)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZQ39_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18963.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
beta-N-acetylhexosaminidase
L1_008_030G1_scaffold_161_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24353..25384)
DNA (1032bp) protein (344aa)
Endonuclease/exonuclease/phosphatase family protein n=11 Tax=Bacteroides RepID=C3R8E1_9BACE
endonuclease/exonuclease/phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EIY77676.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_030G1_scaffold_161_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25630..28431)
DNA (2802bp) protein (934aa)
Excinuclease ABC subunit A n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HS78_BACVU
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
UvrABC SOS-repair system protein excinuclease A
L1_008_030G1_scaffold_161_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28513..30012
DNA (1500bp) protein (500aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z334_9BACE
secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77678.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_030G1_scaffold_161_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30299..30871)
DNA (573bp) protein (191aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=A6KWJ7_BACV8
chromate transport protein
Chromate transporter {ECO:0000313|EMBL:EFV66105.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_030G1_scaffold_161_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30868..31416)
DNA (549bp) protein (183aa)
Chromate transport protein n=7 Tax=Bacteroides RepID=C6Z332_9BACE
chromate transport protein
Chromate ion transporter (CHR) family chromate transporter {ECO:0000313|EMBL:EIY77680.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_030G1_scaffold_161_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31421..35437)
DNA (4017bp) protein (1339aa)
Sensor histidine kinase/response regulator n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8R6_BACVU
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EFG17729.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
two-component system sensor histidine kinase/response regulator, hybrid
L1_008_030G1_scaffold_161_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35515..39219)
DNA (3705bp) protein (1235aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Putative phosphoribosylformylglycinamidine synthase n=2 Tax=Bacteroides RepID=A6KWJ4_BACV8
L1_008_030G1_scaffold_161_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39370..40029
DNA (660bp) protein (220aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6KWJ3_BACV8
hypothetical protein
LysE type translocator family protein {ECO:0000313|EMBL:KDS54619.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_030G1_scaffold_161_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40101..40643
DNA (543bp) protein (181aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3R8D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS26372.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy