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L1_008_030G1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_182_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..288)
DNA (288bp) protein (96aa)
50S ribosomal protein L11 n=15 Tax=Bacteroides RepID=D6CXR0_9BACE
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_182_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(350..892)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=21 Tax=Bacteroides RepID=D6CXR1_9BACE
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L1_008_030G1_scaffold_182_3
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(908..1099)
DNA (192bp) protein (64aa)
Protein translocase subunit SecE n=18 Tax=Bacteroides RepID=A5ZBF8_9BACE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
secE; Putative preprotein translocase SecE subunit
L1_008_030G1_scaffold_182_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1239..2423)
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Bacteroides caccae RepID=A5ZBF7_9BACE
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_182_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2982..3281)
DNA (300bp) protein (100aa)
Ribosomal subunit interface protein n=3 Tax=Bacteroides RepID=A5ZBF6_9BACE
Ribosomal subunit interface protein {ECO:0000313|EMBL:EDM21825.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
sigma-54 modulation protein
L1_008_030G1_scaffold_182_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3298..4179)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=2 Tax=Bacteroides caccae RepID=A5ZBF5_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
integrase, site-specific recombinase
L1_008_030G1_scaffold_182_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4253..4444)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=3 Tax=Bacteroides RepID=A5ZBF4_9BACE
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
30S ribosomal protein S21
L1_008_030G1_scaffold_182_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4634..6415
DNA (1782bp) protein (594aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBF3_9BACE
Creatinase {ECO:0000313|EMBL:EDM21822.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_182_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6495..7010
DNA (516bp) protein (172aa)
Bacterial transferase hexapeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZBF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74279.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L1_008_030G1_scaffold_182_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7227..7649
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18912.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thiol:disulfide interchange protein
L1_008_030G1_scaffold_182_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7646..9280
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5USQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74156.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thiol:disulfide interchange protein TlpA
L1_008_030G1_scaffold_182_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9418..10641)
DNA (1224bp) protein (408aa)
3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBE9_9BACE
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EDM21818.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_182_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10659..12176)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Bacteroides RepID=A5ZBE8_9BACE
L1_008_030G1_scaffold_182_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12271..14343
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7Q9_9BACE
7TM receptor with intracellular HD hydrolase {ECO:0000313|EMBL:EDM21816.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
uncharacterized domain HDIG
L1_008_030G1_scaffold_182_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14318..14788)
DNA (471bp) protein (157aa)
protein tyrosine phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=3 Tax=Bacteroides RepID=A5ZBE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74152.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_182_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14849..16645)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18918.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_182_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16702..19158)
DNA (2457bp) protein (819aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
primosomal protein N' (EC:3.6.1.-)
Primosomal protein N n=2 Tax=Bacteroides RepID=A5ZBE4_9BACE
L1_008_030G1_scaffold_182_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19238..19810)
DNA (573bp) protein (191aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21812.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_182_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19945..20376)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PQT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74148.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_182_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21497..22867)
DNA (1371bp) protein (457aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBE1_9BACE
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDM21810.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
L1_008_030G1_scaffold_182_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23096..24529)
DNA (1434bp) protein (478aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=3 Tax=Bacteroides RepID=I9PRD5_9BACE
L1_008_030G1_scaffold_182_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24706..26016
DNA (1311bp) protein (437aa)
Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family n=3 Tax=Bacteroides RepID=A5ZBD8_9BACE
Anaerobic C4-dicarboxylate uptake (Dcu) family transporter {ECO:0000313|EMBL:CCZ74145.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
anaerobic c4-dicarboxylate membrane transporter family protein
L1_008_030G1_scaffold_182_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26049..27107
DNA (1059bp) protein (353aa)
asparaginase (EC:3.5.1.1)
L-asparaginase, type II n=2 Tax=Bacteroides RepID=I8UXL3_9BACE
L-asparaginase type II {ECO:0000313|EMBL:CCZ74144.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_182_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27123..28310
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18926.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_182_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28448..31381)
DNA (2934bp) protein (978aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBD5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21804.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
lipoprotein
L1_008_030G1_scaffold_182_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31481..32872)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18928.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_182_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32901..34976)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EFW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18929.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_182_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34997..38347)
DNA (3351bp) protein (1117aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXL7_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18930.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_182_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38405..39439)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21800.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative anti-sigma factor
L1_008_030G1_scaffold_182_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39535..40086
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides RepID=A5ZBD0_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CCZ74137.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative sigma factor
Displaying items 1-30 of 32 in total

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