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L1_008_030G1_scaffold_215

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_215_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..188)
DNA (186bp) protein (62aa)
Site-specific recombinase, phage integrase family n=4 Tax=Bacteroides caccae RepID=A5ZLM4_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM18971.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Phage integrase family.
L1_008_030G1_scaffold_215_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(351..1988)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=3 Tax=Bacteroides RepID=A5ZLM5_9BACE
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
groEL; molecular chaperone GroEL
L1_008_030G1_scaffold_215_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2031..2303)
DNA (273bp) protein (91aa)
10 kDa chaperonin n=8 Tax=Bacteroides RepID=A5ZLM6_9BACE
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_215_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2828..3376)
DNA (549bp) protein (183aa)
Hydrolase, NUDIX family n=2 Tax=Bacteroides caccae RepID=A5ZLM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18811.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase
L1_008_030G1_scaffold_215_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3446..3613)
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZLM9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19046.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_215_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3775..5223
DNA (1449bp) protein (483aa)
4Fe-4S binding domain protein n=2 Tax=Bacteroides caccae RepID=A5ZLN0_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDM19047.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Iron only hydrogenase large subunit, C-terminal domain
L1_008_030G1_scaffold_215_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5204..6250
DNA (1047bp) protein (349aa)
biotin synthase (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7L9_9BACE
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:CCZ74113.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_215_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6289..7710
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZLN2_9BACE
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EDM19049.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
thiH; thiamine biosynthesis protein ThiH
L1_008_030G1_scaffold_215_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7707..8933
DNA (1227bp) protein (409aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PQK4_9BACE
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EIY18816.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
GTP-binding protein
L1_008_030G1_scaffold_215_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9022..11559
DNA (2538bp) protein (846aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDM19051.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM19051.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, S9A/B/C family, catalytic domain protein n=3 Tax=Bacteroides RepID=A5ZLN4_9BACE
alanyl dipeptidyl peptidase
L1_008_030G1_scaffold_215_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11650..13014)
DNA (1365bp) protein (455aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Bacteroides RepID=I9PR50_9BACE
L1_008_030G1_scaffold_215_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13218..13898)
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=root RepID=I9EFM9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18819.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted Zn-dependent protease
L1_008_030G1_scaffold_215_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14016..15320)
DNA (1305bp) protein (435aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8UXC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18820.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_215_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15422..16693)
DNA (1272bp) protein (424aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=3 Tax=Bacteroides RepID=A5ZLN8_9BACE
L1_008_030G1_scaffold_215_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16690..17178)
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Bacteroides RepID=A5ZLN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73031.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_030G1_scaffold_215_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17342..18007)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZLP1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73030.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_215_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18015..20042)
DNA (2028bp) protein (676aa)
Peptidase family M49. (EC:3.4.14.4)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EFN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18824.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_215_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20159..20623)
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZLP4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19061.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator, AraC family
L1_008_030G1_scaffold_215_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20894..22699
DNA (1806bp) protein (602aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=3 Tax=Bacteroides RepID=A5ZLP5_9BACE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CCZ73027.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_215_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23174..23992)
DNA (819bp) protein (273aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZLP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73026.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Tetratricopeptide repeat.
L1_008_030G1_scaffold_215_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24016..24966)
DNA (951bp) protein (317aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZLP9_9BACE
L1_008_030G1_scaffold_215_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25096..26931
DNA (1836bp) protein (612aa)
Arylsulfatase {ECO:0000313|EMBL:EDM19067.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDM19067.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arylsulfatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZLQ0_9BACE
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_008_030G1_scaffold_215_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27029..27718
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18830.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
PAP2 superfamily.
L1_008_030G1_scaffold_215_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27843..28904)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
3-isopropylmalate dehydrogenase n=2 Tax=Bacteroides RepID=A5ZLQ3_9BACE
3-isopropylmalate dehydrogenase
L1_008_030G1_scaffold_215_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28967..30511)
DNA (1545bp) protein (515aa)
(R)-citramalate synthase (EC:2.3.3.13 2.3.3.-)
LeuA allosteric (Dimerization) domain protein n=3 Tax=Bacteroides RepID=A5ZLQ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73021.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_215_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30487..31089)
DNA (603bp) protein (201aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
3-isopropylmalate dehydratase, small subunit n=3 Tax=Bacteroides RepID=A5ZLQ5_9BACE
3-isopropylmalate dehydratase small subunit
L1_008_030G1_scaffold_215_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31132..32526)
DNA (1395bp) protein (465aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=3 Tax=Bacteroides RepID=A5ZLQ6_9BACE
L1_008_030G1_scaffold_215_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32609..34105)
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=2 Tax=Bacteroides RepID=A5ZLQ7_9BACE
L1_008_030G1_scaffold_215_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34503..34745)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5UWC6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73017.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying 29 items

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