ggKbase home page

L1_008_030G1_scaffold_306

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_306_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


1..246
DNA (246bp) protein (82aa)
50S ribosomal protein L11 n=3 Tax=Bacteroides RepID=A5ZBG0_9BACE
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L1_008_030G1_scaffold_306_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


262..960
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Bacteroides caccae RepID=A5ZBG1_9BACE
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L1P
L1_008_030G1_scaffold_306_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


976..1494
DNA (519bp) protein (173aa)
Ribosomal protein L10 n=2 Tax=Bacteroides caccae RepID=A5ZBG2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18901.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rplJ; 50S ribosomal protein L10
L1_008_030G1_scaffold_306_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


1542..1916
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=22 Tax=root RepID=D6CXQ7_9BACE
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_306_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2021..5833
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=Bacteroides caccae RepID=A5ZBG4_9BACE
L1_008_030G1_scaffold_306_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5939..10222
DNA (4284bp) protein (1428aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Bacteroides caccae RepID=A5ZBG5_9BACE
L1_008_030G1_scaffold_306_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10364..10672
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0X4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18897.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Protein of unknown function (DUF3467).
L1_008_030G1_scaffold_306_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


10809..11210
DNA (402bp) protein (134aa)
30S ribosomal protein S12 n=26 Tax=root RepID=RS12_BACFN
rpsL; putative 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L1_008_030G1_scaffold_306_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


11353..11829
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=5 Tax=Bacteroides RepID=A5ZBG8_9BACE
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SSU ribosomal protein S7P
L1_008_030G1_scaffold_306_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11877..13994
DNA (2118bp) protein (706aa)
Elongation factor G n=2 Tax=Bacteroides caccae RepID=A5ZBG9_9BACE
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
fusA; elongation factor G
L1_008_030G1_scaffold_306_11
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


14075..14380
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=51 Tax=root RepID=RS10_BACTN
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L1_008_030G1_scaffold_306_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


14399..15016
DNA (618bp) protein (206aa)
50S ribosomal protein L3 n=2 Tax=Bacteroides caccae RepID=A5ZBH1_9BACE
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L3P
L1_008_030G1_scaffold_306_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


15016..15642
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=2 Tax=Bacteroides caccae RepID=A5ZBH2_9BACE
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L4P
L1_008_030G1_scaffold_306_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


15659..15949
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=2 Tax=Bacteroides caccae RepID=A5ZBH3_9BACE
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rplW; 50S ribosomal protein L23
L1_008_030G1_scaffold_306_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


15955..16779
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=16 Tax=Bacteroides RepID=A5ZBH4_9BACE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L2P
L1_008_030G1_scaffold_306_16
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


16800..17069
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=18 Tax=Bacteroides RepID=D6CXP5_9BACE
SSU ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L1_008_030G1_scaffold_306_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17105..17515
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=4 Tax=Bacteroides RepID=A5ZBH6_9BACE
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L22P
L1_008_030G1_scaffold_306_18
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17521..18252
DNA (732bp) protein (244aa)
30S ribosomal protein S3 n=4 Tax=Bacteroides RepID=A5ZBH7_9BACE
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
rpsC; 30S ribosomal protein S3
L1_008_030G1_scaffold_306_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18276..18710
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=30 Tax=Bacteroides RepID=D6CXP2_9BACE
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L1_008_030G1_scaffold_306_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18716..18913
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=2 Tax=Bacteroides caccae RepID=A5ZBH9_9BACE
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rpmC; 50S ribosomal protein L29
L1_008_030G1_scaffold_306_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18922..19179
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Bacteroides caccae RepID=A5ZBI0_9BACE
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rpsQ; 30S ribosomal protein S17
L1_008_030G1_scaffold_306_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19182..19547
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=41 Tax=Bacteroides RepID=RL14_BACFN
rplN; putative 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L1_008_030G1_scaffold_306_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19568..19885
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=18 Tax=Bacteroides RepID=D6CXN8_9BACE
LSU ribosomal protein L24P
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_306_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19888..20445
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=7 Tax=Bacteroides RepID=RL5_BACTN
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_306_25
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


20451..20750
DNA (300bp) protein (100aa)
30S ribosomal protein S14 n=14 Tax=Bacteroides RepID=D6CXN6_9BACE
SSU ribosomal protein S14P
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L1_008_030G1_scaffold_306_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


20804..21199
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=2 Tax=Bacteroides caccae RepID=A5ZBI5_9BACE
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rpsH; 30S ribosomal protein S8
L1_008_030G1_scaffold_306_27
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21217..21786
DNA (570bp) protein (190aa)
50S ribosomal protein L6 n=12 Tax=root RepID=A5ZBI6_9BACE
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
LSU ribosomal protein L6P
L1_008_030G1_scaffold_306_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21808..22152
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=2 Tax=Bacteroides caccae RepID=A5ZBI7_9BACE
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
LSU ribosomal protein L18P
Displaying 28 items

View Taxonomy