ggKbase home page

L1_008_030G1_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_328_1
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(323..1108)
DNA (786bp) protein (262aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D66318 related cluster n=1 Tax=unknown RepID=UPI0003D66318
tRNA pseudouridine synthase A
L1_008_030G1_scaffold_328_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1105..1908)
DNA (804bp) protein (268aa)
UPI0003D64E0F related cluster n=1 Tax=unknown RepID=UPI0003D64E0F
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
cobalt transporter
L1_008_030G1_scaffold_328_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1898..2758)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D63623 related cluster n=1 Tax=unknown RepID=UPI0003D63623
ABC transporter
L1_008_030G1_scaffold_328_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2758..3705)
DNA (948bp) protein (316aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNF5_9FIRM
cobalt ABC transporter ATPase
L1_008_030G1_scaffold_328_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(3893..4228)
DNA (336bp) protein (112aa)
50S ribosomal protein L17 n=9 Tax=Veillonella RepID=D1BP35_VEIPT
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L1_008_030G1_scaffold_328_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4241..5245)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FNF3_9FIRM
DNA-directed RNA polymerase subunit alpha
L1_008_030G1_scaffold_328_7
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(5317..5706)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=13 Tax=Veillonella RepID=D1BP37_VEIPT
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L1_008_030G1_scaffold_328_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(5726..6094)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=7 Tax=Veillonella RepID=D1BP38_VEIPT
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
L1_008_030G1_scaffold_328_9
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6118..6231)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=13 Tax=Veillonella RepID=D1BP39_VEIPT
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L1_008_030G1_scaffold_328_10
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6258..6476)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=8 Tax=Veillonella RepID=D1BP40_VEIPT
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L1_008_030G1_scaffold_328_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6500..7270)
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Methionine aminopeptidase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE8_9FIRM
methionine aminopeptidase
L1_008_030G1_scaffold_328_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7274..7837)
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Adenylate kinase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE7_9FIRM
adenylate kinase
L1_008_030G1_scaffold_328_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(7850..9112)
DNA (1263bp) protein (421aa)
Protein translocase subunit SecY n=2 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP43_VEIPT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
preprotein translocase subunit SecY
L1_008_030G1_scaffold_328_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9114..9557)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE5_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
50S ribosomal protein L15
L1_008_030G1_scaffold_328_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9580..9759)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=8 Tax=Veillonella RepID=D1BP45_VEIPT
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L1_008_030G1_scaffold_328_16
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9774..10277)
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=8 Tax=Veillonella RepID=D1BP46_VEIPT
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L1_008_030G1_scaffold_328_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(10296..10676)
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE2_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
50S ribosomal protein L18
L1_008_030G1_scaffold_328_18
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(10694..11239)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=7 Tax=Veillonella RepID=D1BP48_VEIPT
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L1_008_030G1_scaffold_328_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11264..11650)
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=7 Tax=Veillonella RepID=D1BP49_VEIPT
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L1_008_030G1_scaffold_328_20
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11678..11947)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=6 Tax=Veillonella RepID=C4FND9_9FIRM
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
30S ribosomal protein S14
L1_008_030G1_scaffold_328_21
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11964..12503)
DNA (540bp) protein (180aa)
UPI0003D66DB5 related cluster n=1 Tax=unknown RepID=UPI0003D66DB5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
50S ribosomal protein L5
L1_008_030G1_scaffold_328_22
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(12527..12847)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=11 Tax=Veillonella RepID=D1BP52_VEIPT
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
L1_008_030G1_scaffold_328_23
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(12866..13234)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=5 Tax=Veillonella RepID=E1L679_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
50S ribosomal protein L14
L1_008_030G1_scaffold_328_24
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13259..13519)
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=2 Tax=Veillonella RepID=D1BP54_VEIPT
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
L1_008_030G1_scaffold_328_25
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13559..13762)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=13 Tax=Veillonella RepID=D1BP55_VEIPT
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
L1_008_030G1_scaffold_328_26
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13752..14189)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=5 Tax=Veillonella RepID=E1L682_9FIRM
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L1_008_030G1_scaffold_328_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(14189..14854)
DNA (666bp) protein (222aa)
30S ribosomal protein S3 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FND2_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
30S ribosomal protein S3
L1_008_030G1_scaffold_328_28
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(14871..15206)
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=13 Tax=Veillonella RepID=D1BP58_VEIPT
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L1_008_030G1_scaffold_328_29
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15220..15501)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FND0_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
30S ribosomal protein S19
L1_008_030G1_scaffold_328_30
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15525..16355)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNC9_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
50S ribosomal protein L2
Displaying items 1-30 of 35 in total

View Taxonomy