ggKbase home page

L1_008_064G1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_3_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(270..1049)
DNA (780bp) protein (260aa)
Cof-like hydrolase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD61_9BACE
Cof-like hydrolase {ECO:0000313|EMBL:EDM22430.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hydrolase
L1_008_064G1_scaffold_3_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1200..2009)
DNA (810bp) protein (270aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZD60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21930.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_3_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1984..2787)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PYU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21931.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted phosphohydrolases
L1_008_064G1_scaffold_3_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3085..5367
DNA (2283bp) protein (761aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V9G6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73915.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_3_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5404..6078
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PZF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21933.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L1_008_064G1_scaffold_3_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6093..8417
DNA (2325bp) protein (775aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UYY4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73917.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter permease
L1_008_064G1_scaffold_3_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8449..9807)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V649_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EIY21935.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_3_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9962..10609
DNA (648bp) protein (216aa)
HAD hydrolase, family IA n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PYV1_9BACE
HAD hydrolase, family IA {ECO:0000313|EMBL:EIY21936.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
phosphatase/phosphohexomutase
L1_008_064G1_scaffold_3_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10794..11615
DNA (822bp) protein (274aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Bacteroides caccae RepID=A5ZD53_9BACE
L1_008_064G1_scaffold_3_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11624..12781
DNA (1158bp) protein (386aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides caccae RepID=A5ZD52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21938.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
sugar transporter
L1_008_064G1_scaffold_3_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12878..15094)
DNA (2217bp) protein (739aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=2 Tax=Bacteroides RepID=I9ENT8_9BACE
RelA/SpoT family protein {ECO:0000313|EMBL:EIY21939.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_064G1_scaffold_3_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15201..16718
DNA (1518bp) protein (506aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZD50_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21940.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_3_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16842..17465
DNA (624bp) protein (208aa)
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EDM22418.1}; EC=2.3.1.28 {ECO:0000313|EMBL:EDM22418.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Chloramphenicol O-acetyltransferase n=2 Tax=Bacteroides caccae RepID=A5ZD49_9BACE
chloramphenicol acetyltransferase
L1_008_064G1_scaffold_3_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17502..18815
DNA (1314bp) protein (438aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZD48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21942.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Lipid A 3-O-deacylase (PagL).
L1_008_064G1_scaffold_3_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18877..20043
DNA (1167bp) protein (389aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
formate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2 6.3.4.-)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD47_9BACE
L1_008_064G1_scaffold_3_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20591..22108
DNA (1518bp) protein (506aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=3 Tax=Bacteroides RepID=A5ZD46_9BACE
L1_008_064G1_scaffold_3_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22120..22365
DNA (246bp) protein (82aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein n=3 Tax=Bacteroides RepID=A5ZD45_9BACE
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein {ECO:0000313|EMBL:EDM22414.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_064G1_scaffold_3_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22440..22871
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZD44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73929.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_3_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22855..23988
DNA (1134bp) protein (378aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD43_9BACE
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_064G1_scaffold_3_20
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24046..24303
DNA (258bp) protein (86aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase subunit c n=26 Tax=Bacteroides RepID=ATPL_BACTN
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L1_008_064G1_scaffold_3_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24360..24863
DNA (504bp) protein (168aa)
ATP synthase subunit b n=3 Tax=Bacteroides RepID=A5ZD41_9BACE
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATP synthase subunit B
L1_008_064G1_scaffold_3_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24869..25429
DNA (561bp) protein (187aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Bacteroides RepID=A5ZD40_9BACE
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_064G1_scaffold_3_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25429..27012
DNA (1584bp) protein (528aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PYW4_9BACE
L1_008_064G1_scaffold_3_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27025..27921
DNA (897bp) protein (299aa)
ATP synthase gamma chain n=2 Tax=Bacteroides caccae RepID=A5ZD38_9BACE
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATP synthase F0F1 subunit gamma
L1_008_064G1_scaffold_3_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28255..30789
DNA (2535bp) protein (845aa)
HRDC domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD37_9BACE
HRDC domain protein {ECO:0000313|EMBL:EDM22406.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA repair and recombination protein
L1_008_064G1_scaffold_3_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30795..31415)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZD36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22405.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted membrane protein
L1_008_064G1_scaffold_3_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31412..31690)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8V667_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74972.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_3_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32021..32938)
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PYW7_9BACE
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIY21956.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
dTDP-4-dehydrorhamnose reductase
L1_008_064G1_scaffold_3_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33011..34270)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V9J0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21957.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_3_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34563..35462)
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD32_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDM22401.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator, AraC family
Displaying items 1-30 of 299 in total

View Taxonomy