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L1_008_064G1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_50_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(499..1632)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ64_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73936.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
permease
L1_008_064G1_scaffold_50_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1649..2248)
DNA (600bp) protein (200aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Thymidine kinase n=2 Tax=Bacteroides caccae RepID=A5ZJ65_9BACE
thymidine kinase
L1_008_064G1_scaffold_50_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2414..5629
DNA (3216bp) protein (1072aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ66_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM19696.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-dependent receptor plug
L1_008_064G1_scaffold_50_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5645..7165
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16898.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_50_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7178..9016
DNA (1839bp) protein (613aa)
Alkaline phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZJ68_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16899.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alkaline phosphatase
L1_008_064G1_scaffold_50_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9203..9808
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73941.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_50_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9819..10493
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKE0_9BACE
conserved hypothetical protein TIGR00096
L1_008_064G1_scaffold_50_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10528..11385
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJ71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19701.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_064G1_scaffold_50_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11484..12176
DNA (693bp) protein (231aa)
HAD hydrolase, TIGR02254 family n=2 Tax=Bacteroides caccae RepID=A5ZJ72_9BACE
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:EIY16903.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
HAD superfamily (subfamily IA) hydrolase, TIGR02254
L1_008_064G1_scaffold_50_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12239..12898
DNA (660bp) protein (220aa)
MarC family membrane protein n=3 Tax=Bacteroides RepID=I9EAK6_9BACE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
conserved hypothetical protein TIGR00427
L1_008_064G1_scaffold_50_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12969..14528)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZJ74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73946.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_50_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14545..17511)
DNA (2967bp) protein (989aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9PKE3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16906.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_50_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18137..19330)
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJ76_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM19706.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Site-specific recombinase XerD
L1_008_064G1_scaffold_50_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19432..19530
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UV92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16907.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_064G1_scaffold_50_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19780..23004
DNA (3225bp) protein (1075aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides RepID=R5UE62_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ73949.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
TonB-dependent receptor plug
L1_008_064G1_scaffold_50_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23022..24647
DNA (1626bp) protein (542aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZJ79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73950.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_50_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24661..25542
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5US32_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73951.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_50_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25722..26978
DNA (1257bp) protein (419aa)
GTPase HflX n=3 Tax=root RepID=A5ZJ81_9BACE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
GTP-binding protein HflX
L1_008_064G1_scaffold_50_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26996..29026
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16913.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_50_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29216..30853
DNA (1638bp) protein (546aa)
fumarase (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=2 Tax=Bacteroides caccae RepID=A5ZJ83_9BACE
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDM19713.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_064G1_scaffold_50_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30960..32120
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7C0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73955.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_50_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32223..33569)
DNA (1347bp) protein (449aa)
Outer membrane efflux protein n=3 Tax=Bacteroides RepID=A5ZJ85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73956.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
outer membrane protein TolC
L1_008_064G1_scaffold_50_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33566..36598)
DNA (3033bp) protein (1011aa)
RND transporter, HAE1 family n=3 Tax=Bacteroides RepID=A5ZJ86_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY16917.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Cation/multidrug efflux pump
L1_008_064G1_scaffold_50_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36611..37696)
DNA (1086bp) protein (362aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides caccae RepID=A5ZJ87_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDM19717.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RND family efflux transporter, MFP subunit
L1_008_064G1_scaffold_50_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37821..38753)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UE71_9BACE
ribosome-associated GTPase
L1_008_064G1_scaffold_50_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38768..39328)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=3 Tax=Bacteroides RepID=A5ZJ89_9BACE
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribosome recycling factor
L1_008_064G1_scaffold_50_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39380..40291)
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PKF6_9BACE
Putative membrane protein {ECO:0000313|EMBL:EDM19720.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted permease, DMT superfamily
L1_008_064G1_scaffold_50_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40742..41452)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uridylate kinase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UZ34_9BACE
putative uridylate kinase
L1_008_064G1_scaffold_50_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41507..42835)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=3 Tax=Bacteroides RepID=A5ZJ92_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EDM19722.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA-damage-inducible protein F
L1_008_064G1_scaffold_50_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42972..43631
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5UE76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73964.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying items 1-30 of 101 in total

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