ggKbase home page

L1_008_064G1_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_118_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

597..1001
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L0T1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39295.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_118_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1108..1923
DNA (816bp) protein (272aa)
MotA/TolQ/ExbB proton channel n=4 Tax=Bacteroides RepID=A6L0T2_BACV8
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ABR39296.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_118_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1952..2557
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L0T3_BACV8
hypothetical protein
Biopolymer transport ExbD/TolR family protein {ECO:0000313|EMBL:KDS55282.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_118_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2570..3220
DNA (651bp) protein (217aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L0T4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY72868.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_118_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3250..4062
DNA (813bp) protein (271aa)
Outer membrane protein TonB n=2 Tax=Bacteroides vulgatus RepID=A6L0T5_BACV8
outer membrane protein TonB
TonB family C-terminal domain protein {ECO:0000313|EMBL:KDS55280.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_118_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4072..5016
DNA (945bp) protein (315aa)
Putative phosphate ABC transporter phosphate-binding component n=2 Tax=Bacteroides vulgatus RepID=A6L0T6_BACV8
phosphate ABC transporter substrate-binding protein
PBP superfamily domain protein {ECO:0000313|EMBL:KDS55279.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_118_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5040..6455
DNA (1416bp) protein (472aa)
Tetratricopeptide repeat family protein n=2 Tax=Bacteroides vulgatus RepID=A6L0T7_BACV8
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABR39301.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_118_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6641..7483
DNA (843bp) protein (281aa)
ABC transporter ATP-binding protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H0S6_BACVU
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABR39302.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_118_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7498..8388
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L0T9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39303.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_118_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8385..8750
DNA (366bp) protein (122aa)
Transcriptional regulator, GntR family n=2 Tax=Bacteroides vulgatus RepID=D4V3Z9_BACVU
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:KDS30361.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_064G1_scaffold_118_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8848..10341)
DNA (1494bp) protein (498aa)
PA domain protein n=5 Tax=root RepID=C6ZAJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY72861.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
aminopeptidase
L1_008_064G1_scaffold_118_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10588..11853
DNA (1266bp) protein (422aa)
MATE efflux family protein n=2 Tax=Bacteroides vulgatus RepID=D4V401_BACVU
MATE efflux family protein {ECO:0000313|EMBL:KDS30359.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
transmembrane transport efflux protein
L1_008_064G1_scaffold_118_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11947..12885
DNA (939bp) protein (313aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Adenylosuccinate lyase n=6 Tax=Bacteroides RepID=A6L0U3_BACV8
L1_008_064G1_scaffold_118_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12872..13198
DNA (327bp) protein (109aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Adenylosuccinate lyase n=6 Tax=Bacteroides RepID=A6L0U3_BACV8
L1_008_064G1_scaffold_118_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13274..14737
DNA (1464bp) protein (488aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Pseudouridine synthase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TU53_BACVU
ribosomal large subunit pseudouridine synthase B
L1_008_064G1_scaffold_118_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14760..16163
DNA (1404bp) protein (468aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=3 Tax=Bacteroides RepID=C6ZAJ0_9BACE
L1_008_064G1_scaffold_118_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16326..16820
DNA (495bp) protein (165aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L0U6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS55269.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_118_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17056..17631
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L0U7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR97615.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_118_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17621..17866
DNA (246bp) protein (82aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6ZAI7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS30352.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_008_064G1_scaffold_118_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18166..18627
DNA (462bp) protein (154aa)
50S ribosomal protein L13 n=14 Tax=Bacteroides RepID=A6L0U9_BACV8
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_118_21
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18634..19020
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=13 Tax=Bacteroides RepID=RS9_BACV8
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L1_008_064G1_scaffold_118_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19153..19992
DNA (840bp) protein (280aa)
30S ribosomal protein S2 n=8 Tax=Bacteroides RepID=RS2_BACV8
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_118_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20125..21114
DNA (990bp) protein (330aa)
Elongation factor Ts n=8 Tax=root RepID=EFTS_BACV8
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_118_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21173..21511)
DNA (339bp) protein (113aa)
Uncharacterized protein n=7 Tax=root RepID=R7NXR8_9BACE
translation initiation factor SUI1
Uncharacterized protein {ECO:0000313|EMBL:CDF17530.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_064G1_scaffold_118_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21629..22279
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=8 Tax=root RepID=A6L0V4_BACV8
redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_118_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22284..22901
DNA (618bp) protein (206aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=7 Tax=Bacteroides RepID=A6L0V5_BACV8
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:KDS55258.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_118_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22898..23380
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Bacteroides vulgatus RepID=ISPF_BACV8
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L1_008_064G1_scaffold_118_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23431..24321)
DNA (891bp) protein (297aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=7 Tax=root RepID=A6L0V7_BACV8
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L1_008_064G1_scaffold_118_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24395..25234
DNA (840bp) protein (280aa)
Ser/Thr phosphatase family protein n=6 Tax=root RepID=C6ZAH6_9BACE
phosphoesterase
Uncharacterized protein {ECO:0000313|EMBL:EOR97626.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_118_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25462..25932
DNA (471bp) protein (157aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6ZAH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR97627.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
Displaying items 1-30 of 80 in total

View Taxonomy