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L1_008_064G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_152_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..82)
DNA (81bp) protein (27aa)
Uncharacterized protein (Fragment) n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PPN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18263.1}; Flags: Fragment;; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_064G1_scaffold_152_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(235..1110)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JDP5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51823.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L1_008_064G1_scaffold_152_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1107..1757)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=I9SLD0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KDS14971.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L1_008_064G1_scaffold_152_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1844..2905)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WR14_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW21782.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L1_008_064G1_scaffold_152_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2909..4240)
DNA (1332bp) protein (444aa)
Putative bacteriophage integrase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WR15_BACF6
putative bacteriophage integrase
Putative bacteriophage integrase {ECO:0000313|EMBL:CBW21783.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L1_008_064G1_scaffold_152_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4256..5572)
DNA (1317bp) protein (439aa)
Putative bacteriophage integrase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WR16_BACF6
putative bacteriophage integrase
Putative bacteriophage integrase {ECO:0000313|EMBL:CBW21784.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L1_008_064G1_scaffold_152_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6638..7933)
DNA (1296bp) protein (432aa)
Thioredoxin n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0E7_9BACE
Thioredoxin {ECO:0000313|EMBL:EIY22551.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Thioredoxin domain-containing protein
L1_008_064G1_scaffold_152_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7947..9113)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21231.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_064G1_scaffold_152_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9115..10830)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72635.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Subtilisin-like serine proteases
L1_008_064G1_scaffold_152_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10864..11877)
DNA (1014bp) protein (338aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDM21233.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDM21233.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Antioxidant, AhpC/TSA family n=2 Tax=Bacteroides RepID=A5ZGC3_9BACE
Peroxiredoxin
L1_008_064G1_scaffold_152_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11916..12959)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22555.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_152_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12996..14552)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3G0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72638.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
SusD family.
L1_008_064G1_scaffold_152_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14564..17932)
DNA (3369bp) protein (1123aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides caccae RepID=I8VB94_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21236.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Outer membrane receptor proteins, mostly Fe transport
L1_008_064G1_scaffold_152_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18160..19374)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72640.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+-dicitrate sensor, membrane component
L1_008_064G1_scaffold_152_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19384..19938)
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor, expansion family 1 n=3 Tax=Bacteroides RepID=I9EQE5_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72641.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase subunit sigma-70
L1_008_064G1_scaffold_152_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19975..20661)
DNA (687bp) protein (229aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bacteroides RepID=A5ZGC9_9BACE
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDM21239.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L1_008_064G1_scaffold_152_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20793..22982)
DNA (2190bp) protein (730aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDM21240.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDM21240.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=3 Tax=Bacteroides RepID=A5ZGD0_9BACE
L1_008_064G1_scaffold_152_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23428..25539
DNA (2112bp) protein (704aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72644.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_152_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25742..26872
DNA (1131bp) protein (377aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3R1_9BACE
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CCZ72645.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_064G1_scaffold_152_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26869..32820)
DNA (5952bp) protein (1984aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21244.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF3320).
L1_008_064G1_scaffold_152_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


32932..34728
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=2 Tax=Bacteroides caccae RepID=A5ZGD5_9BACE
30S ribosomal protein S1 {ECO:0000313|EMBL:EDM21245.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rpsA; 30S ribosomal protein S1
L1_008_064G1_scaffold_152_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34921..35859
DNA (939bp) protein (313aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S9_9BACE
L1_008_064G1_scaffold_152_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35876..37393
DNA (1518bp) protein (506aa)
Conserved domain protein n=3 Tax=Bacteroides RepID=A5ZGD7_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21247.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_064G1_scaffold_152_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37421..37972
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=2 Tax=Bacteroides RepID=A5ZGD8_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CCZ72401.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L1_008_064G1_scaffold_152_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37990..38400
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72400.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_152_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38428..38892
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V804_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72399.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_064G1_scaffold_152_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39002..39790)
DNA (789bp) protein (263aa)
MazG family protein (EC:3.6.1.19)
MazG family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S5_9BACE
MazG family protein {ECO:0000313|EMBL:CCZ72398.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_064G1_scaffold_152_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39863..40906)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22572.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_064G1_scaffold_152_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41056..41694
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=root RepID=A5ZGE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21254.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_064G1_scaffold_152_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


41758..44394
DNA (2637bp) protein (879aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=root RepID=A5ZGE5_9BACE
Displaying items 1-30 of 34 in total

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