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L1_008_064G1_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_177_1
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(87..350)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7KTH8_PECCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR04653.1}; TaxID=1218933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum PCC21.;"
L1_008_064G1_scaffold_177_2
Pantoea rodasii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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788..1090
DNA (303bp) protein (101aa)
Type I restriction-modification system, M subunit n=3 Tax=Enterobacteriaceae RepID=G9RM99_9ENTR
Restriction endonuclease HindVIIP subunit M {ECO:0000313|EMBL:KHJ69402.1}; TaxID=1076549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea rodasii.;"
type I restriction-modification system, M subunit
L1_008_064G1_scaffold_177_3
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1222..1575
DNA (354bp) protein (118aa)
Type I restriction-modification system, M subunit n=2 Tax=Escherichia coli RepID=L3NGX0_ECOLX
type I restriction-modification system, M subunit
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:AFR04652.1}; TaxID=1218933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum PCC21.;"
L1_008_064G1_scaffold_177_4
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1652..2746)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Klebsiella oxytoca M5al RepID=K6KFK3_KLEOX
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
GTP-binding protein YchF
L1_008_064G1_scaffold_177_5
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2873..3457)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
Peptidyl-tRNA hydrolase n=2 Tax=Enterobacteriaceae RepID=R9VGC8_9ENTR
peptidyl-tRNA hydrolase
L1_008_064G1_scaffold_177_6
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3731..4006
DNA (276bp) protein (92aa)
Putative uncharacterized protein ychH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V4Y4_ESCHE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF73776.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
L1_008_064G1_scaffold_177_7
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4124..5173
DNA (1050bp) protein (350aa)
MerR regulatory family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQR7_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43679.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
MerR family transcriptional regulator
L1_008_064G1_scaffold_177_8
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5168..6847)
DNA (1680bp) protein (560aa)
Putative transporter n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WKN1_KLEOK
transporter
Transporter {ECO:0000313|EMBL:AID90762.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
L1_008_064G1_scaffold_177_9
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6970..7917)
DNA (948bp) protein (316aa)
prs; Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Ribose-phosphate pyrophosphokinase n=439 Tax=Enterobacteriaceae RepID=KPRS_SALTI
L1_008_064G1_scaffold_177_10
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7979..8848)
DNA (870bp) protein (290aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VGD2_9ENTR
kinase
L1_008_064G1_scaffold_177_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8845..9468)
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=2 Tax=Citrobacter freundii RepID=K8QM87_CITFR
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lolB; outer membrane lipoprotein LolB
L1_008_064G1_scaffold_177_12
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9670..10926
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
Glutamyl-tRNA reductase n=1 Tax=Enterobacter cloacae UCICRE 11 RepID=V3DB95_ENTCL
L1_008_064G1_scaffold_177_13
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10963..12045
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IT21_9ENTR
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
prfA; peptide chain release factor 1
L1_008_064G1_scaffold_177_14
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12045..12884
DNA (840bp) protein (280aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
prmC; protein-(glutamine-N5) methyltransferase, release factor-specific (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IT58_9ENTR
L1_008_064G1_scaffold_177_15
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12891..13283
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Enterobacter cloacae RepID=UPI0002ECAECB
siroheme synthase
Siroheme synthase {ECO:0000313|EMBL:AHJ73699.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_177_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13287..14096
DNA (810bp) protein (270aa)
SirB1 protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IT37_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43855.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L1_008_064G1_scaffold_177_17
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14134..14988
DNA (855bp) protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VG23_9ENTR
L1_008_064G1_scaffold_177_18
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15142..15609)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BZ60_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG06551.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
L1_008_064G1_scaffold_177_19
unknown

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comp(15904..17004)
DNA (1101bp) protein (367aa)

This feature has no annotations

L1_008_064G1_scaffold_177_20
unknown

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comp(17001..18170)
DNA (1170bp) protein (390aa)

This feature has no annotations

L1_008_064G1_scaffold_177_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18181..19305)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CM00_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73299.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
L1_008_064G1_scaffold_177_22
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19578..20678)
DNA (1101bp) protein (367aa)
Putative calcium/proton exchanger n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZDD0_9ENTR
Putative calcium/proton exchanger {ECO:0000313|EMBL:EFC57018.1}; TaxID=500639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus ATCC 35316.;"
calcium/sodium:proton antiporter
L1_008_064G1_scaffold_177_23
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20948..21178
DNA (231bp) protein (77aa)
Cation transport regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VIG2_9ENTR
chaB; cation transport regulator
Cation transport regulator {ECO:0000313|EMBL:AHJ73703.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_177_24
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21357..22052
DNA (696bp) protein (232aa)
transporter n=1 Tax=Enterobacter cloacae RepID=UPI000314E4B7
transporter
Transporter {ECO:0000313|EMBL:AHJ73704.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_177_25
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22066..22308)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQU1_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44469.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L1_008_064G1_scaffold_177_26
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22524..24308)
DNA (1785bp) protein (595aa)
HAMP domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQZ7_9ENTR
HAMP domain protein {ECO:0000313|EMBL:EJI90625.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
methyl-accepting chemotaxis protein
L1_008_064G1_scaffold_177_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24417..24770)
DNA (354bp) protein (118aa)
Protein ychN n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SK27_CITFR
Protein ychN {ECO:0000313|EMBL:ETX63256.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L1_008_064G1_scaffold_177_28
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24838..26031
DNA (1194bp) protein (398aa)
Nitrate regulatory protein n=1 Tax=Klebsiella pneumoniae UCICRE 14 RepID=V3EFW3_KLEPN
Nitrate regulatory protein {ECO:0000313|EMBL:CDN07153.1}; TaxID=1463164 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. 07A044.;"
ANTAR domain-containing protein
L1_008_064G1_scaffold_177_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26264..27523
DNA (1260bp) protein (420aa)
Nitrate-binding proteint n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WBB4_ENT38
Uncharacterized protein {ECO:0000313|EMBL:KDF17890.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
nitrate-binding proteint
L1_008_064G1_scaffold_177_30
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27525..28406
DNA (882bp) protein (294aa)
Nitrate ABC transporter, inner membrane subunit n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WBB3_ENT38
nitrate ABC transporter, inner membrane subunit
Nitrate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABP60993.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
Displaying items 1-30 of 44 in total

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