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L1_008_064G1_scaffold_273

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_273_1
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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540..1838
-----------------
DNA (1299bp)
protein (433aa)
DEAD/DEAH box helicase n=2 Tax=Veillonella atypica RepID=E1L634_9FIRM
Putative DEAD-box ATP-dependent RNA helicase CshA {ECO:0000313|EMBL:EKY19996.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
DEAD/DEAH box helicase
L1_008_064G1_scaffold_273_2
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1890..4202)
-----------------
DNA (2313bp)
protein (771aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
DNA topoisomerase n=1 Tax=Veillonella atypica KON RepID=L1PX80_9FIRM
DNA topoisomerase III
L1_008_064G1_scaffold_273_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4379..5974
-----------------
DNA (1596bp)
protein (532aa)
Peptide chain release factor 3 n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L879_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
peptide chain release factor 3
L1_008_064G1_scaffold_273_4
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5998..7458
-----------------
DNA (1461bp)
protein (487aa)
Sodium/glutamate symporter n=5 Tax=Veillonella RepID=S2ZSX1_9FIRM
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EKY19999.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
sodium/glutamate symporter
L1_008_064G1_scaffold_273_5
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7533..8387)
-----------------
DNA (855bp)
protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Veillonella RepID=J4JG95_9FIRM
dimethyladenosine transferase
L1_008_064G1_scaffold_273_6
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8445..8975)
-----------------
DNA (531bp)
protein (177aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Ribonuclease M5 n=5 Tax=Veillonella RepID=E1L876_9FIRM
primase/topoisomerase-like protein
L1_008_064G1_scaffold_273_7
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9083..10018
-----------------
DNA (936bp)
protein (312aa)
Transcriptional regulator, LysR family n=2 Tax=Veillonella RepID=E1LCI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79890.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
MarR family transcriptional regulator
L1_008_064G1_scaffold_273_8
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10238..11359
-----------------
DNA (1122bp)
protein (374aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EJO50402.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EJO50402.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Veillonella sp. ACP1 RepID=J4RRE8_9FIRM
vitamin-B12 independent methionine synthase
L1_008_064G1_scaffold_273_9
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11360..12295
-----------------
DNA (936bp)
protein (312aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Veillonella sp. ACP1 RepID=J5AQM2_9FIRM
methionine-R-sulfoxide reductase
L1_008_064G1_scaffold_273_10
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12415..13386)
-----------------
DNA (972bp)
protein (324aa)
3D domain protein n=2 Tax=Veillonella RepID=J4JGB0_9FIRM
3D domain protein {ECO:0000313|EMBL:EKY20005.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
L1_008_064G1_scaffold_273_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13803..15929)
-----------------
DNA (2127bp)
protein (709aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
Polyphosphate kinase n=1 Tax=Veillonella atypica KON RepID=L1PWH5_9FIRM
polyphosphate kinase
L1_008_064G1_scaffold_273_12
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15922..17472)
-----------------
DNA (1551bp)
protein (517aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3A0B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79885.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Exopolyphosphatase-like protein
L1_008_064G1_scaffold_273_13
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(17482..19134)
-----------------
DNA (1653bp)
protein (551aa)
Putative exopolyphosphatase n=1 Tax=Veillonella atypica KON RepID=L1PWB7_9FIRM
Putative exopolyphosphatase {ECO:0000313|EMBL:EKY20008.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
Ppx/GppA phosphatase
L1_008_064G1_scaffold_273_14
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(19169..19939)
-----------------
DNA (771bp)
protein (257aa)
Hydrolase, TatD family n=2 Tax=Veillonella RepID=E1LCH7_9FIRM
TatD family hydrolase {ECO:0000313|EMBL:EPD79883.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
TatD family hydrolase
L1_008_064G1_scaffold_273_15
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19939..21888)
-----------------
DNA (1950bp)
protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Methionine--tRNA ligase n=2 Tax=Veillonella RepID=E1LCH6_9FIRM
methionyl-tRNA synthetase
L1_008_064G1_scaffold_273_16
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21923..22768)
-----------------
DNA (846bp)
protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Ribosomal RNA small subunit methyltransferase I n=3 Tax=Veillonella RepID=E1LCH5_9FIRM
uroporphyrin-III C/tetrapyrrole methyltransferase
L1_008_064G1_scaffold_273_17
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22755..23483)
-----------------
DNA (729bp)
protein (243aa)
Ribosomal protein L11 methyltransferase-like protein n=3 Tax=Veillonella RepID=J5AQV1_9FIRM
Ribosomal protein L11 methyltransferase-like protein {ECO:0000313|EMBL:EUB20746.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
methyltransferase small
L1_008_064G1_scaffold_273_18
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23476..24321)
-----------------
DNA (846bp)
protein (282aa)
PSP1 C-terminal domain protein n=4 Tax=Veillonella RepID=E1L864_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79879.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
PSP1 domain-containing protein
L1_008_064G1_scaffold_273_19
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24322..25362)
-----------------
DNA (1041bp)
protein (347aa)
DNA polymerase III, delta subunit n=3 Tax=Veillonella RepID=J5AQH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79878.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
DNA polymerase III subunits gamma/tau
L1_008_064G1_scaffold_273_20
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25452..26138)
-----------------
DNA (687bp)
protein (229aa)
dTMP kinase {ECO:0000313|EMBL:EUB20755.1}; EC=2.7.4.9 {ECO:0000313|EMBL:EUB20755.1};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
dTMP kinase n=2 Tax=Veillonella RepID=E1LCH1_9FIRM
thymidylate kinase
L1_008_064G1_scaffold_273_21
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26141..27622)
-----------------
DNA (1482bp)
protein (494aa)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L861_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFL55476.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
Orn/Lys/Arg decarboxylase major region
L1_008_064G1_scaffold_273_22
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27681..28253)
-----------------
DNA (573bp)
protein (191aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Peptidyl-tRNA hydrolase n=5 Tax=Veillonella RepID=E1L860_9FIRM
peptidyl-tRNA hydrolase
Displaying 22 items

View Taxonomy