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L1_008_064G1_scaffold_313

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_313_1
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(493..666)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:GAE18920.1}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
L1_008_064G1_scaffold_313_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(675..1667)
DNA (993bp) protein (331aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bacteroides RepID=C6Z0F5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19843.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ion-channel protein, oxidoreductase
L1_008_064G1_scaffold_313_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1691..3031)
DNA (1341bp) protein (447aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=4 Tax=Bacteroides RepID=C6Z0F4_9BACE
L1_008_064G1_scaffold_313_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3046..3450)
DNA (405bp) protein (135aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KYP0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98662.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_313_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3548..4186)
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Orotate phosphoribosyltransferase n=7 Tax=Bacteroides RepID=PYRE_BACV8
L1_008_064G1_scaffold_313_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4286..4981)
DNA (696bp) protein (232aa)
ComF family protein n=3 Tax=Bacteroides RepID=D4VAU7_BACVU
Amidophosphoribosyl-transferase {ECO:0000313|EMBL:EFV68898.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
amidophosphoribosyl-transferase
L1_008_064G1_scaffold_313_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4962..5447)
DNA (486bp) protein (162aa)
Regulatory protein RecX n=2 Tax=Bacteroides RepID=C6Z0F0_9BACE
regulatory protein
RecX family protein {ECO:0000313|EMBL:KDS27940.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_064G1_scaffold_313_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5449..6285)
DNA (837bp) protein (279aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Release factor glutamine methyltransferase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P292_9BACE
protoporphyrinogen oxidase
L1_008_064G1_scaffold_313_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6330..7382
DNA (1053bp) protein (351aa)
Riboflavin biosynthesis protein RibD n=5 Tax=root RepID=D4VAU4_BACVU
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
riboflavin biosynthesis protein ribD
L1_008_064G1_scaffold_313_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7510..8907
DNA (1398bp) protein (466aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A6KYP6_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS53433.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_008_064G1_scaffold_313_11
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8941..9672
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Isoprenyl transferase n=8 Tax=root RepID=A6KYP7_BACV8
UDP pyrophosphate synthase
L1_008_064G1_scaffold_313_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9684..12326
DNA (2643bp) protein (881aa)
Outer membrane protein assembly complex, YaeT protein n=2 Tax=Bacteroides RepID=D4VAU1_BACVU
Outer membrane assembly complex, YaeT protein {ECO:0000313|EMBL:KDS53431.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
membrane protein
L1_008_064G1_scaffold_313_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12347..12862
DNA (516bp) protein (172aa)
Cationic outer membrane protein n=2 Tax=Bacteroides vulgatus RepID=A6KYQ0_BACV8
cationic outer membrane protein
Cationic outer membrane protein {ECO:0000313|EMBL:ABR38564.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_313_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12920..13423
DNA (504bp) protein (168aa)
Outer membrane protein n=7 Tax=Bacteroides RepID=C6Z0E3_9BACE
outer membrane protein OmpH
Outer membrane family protein {ECO:0000313|EMBL:KDS27947.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_064G1_scaffold_313_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13499..14371
DNA (873bp) protein (291aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glutamate racemase n=3 Tax=Bacteroides RepID=C3RA01_9BACE
glutamate racemase
L1_008_064G1_scaffold_313_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14428..15300
DNA (873bp) protein (291aa)
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Pyridoxine kinase n=5 Tax=Bacteroides RepID=A6KYQ3_BACV8
L1_008_064G1_scaffold_313_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15687..16925)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KYQ4_BACV8
hypothetical protein
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EET14358.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_064G1_scaffold_313_18
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16935..17270)
DNA (336bp) protein (112aa)
Ribosome-binding factor A n=15 Tax=root RepID=A6KYQ5_BACV8
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000313|EMBL:EEO59985.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L1_008_064G1_scaffold_313_19
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17344..17982)
DNA (639bp) protein (213aa)
O-methyltransferase n=6 Tax=Bacteroides RepID=A6KYQ6_BACV8
O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EFV68885.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_064G1_scaffold_313_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17998..19461)
DNA (1464bp) protein (488aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Pyruvate kinase n=14 Tax=Bacteroides RepID=A6KYQ7_BACV8
L1_008_064G1_scaffold_313_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19494..19916)
DNA (423bp) protein (141aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
3-dehydroquinate dehydratase n=4 Tax=Bacteroides RepID=C6Z0D6_9BACE
3-dehydroquinate dehydratase
L1_008_064G1_scaffold_313_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19983..20924
DNA (942bp) protein (314aa)
Tyrosine recombinase XerC n=7 Tax=Bacteroides RepID=A6KYQ9_BACV8
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_064G1_scaffold_313_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21066..22742
DNA (1677bp) protein (559aa)
Tetratricopeptide repeat protein n=5 Tax=Bacteroides RepID=C6Z0D4_9BACE
plasminogen binding protein
Putative plasminogen binding protein {ECO:0000313|EMBL:ABR38574.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_313_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22896..23963
DNA (1068bp) protein (356aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z0D3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET14351.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_064G1_scaffold_313_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23968..24888
DNA (921bp) protein (307aa)
Magnesium chelatase, subunit ChlI n=5 Tax=Bacteroides RepID=A6KYR2_BACV8
magnesium chelatase subunit ChlI
AAA domain family protein {ECO:0000313|EMBL:KDS27958.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Displaying 25 items

View Taxonomy