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L1_008_064G1_scaffold_315

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_315_1
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..853
DNA (852bp) protein (284aa)
atpG; ATP synthase gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THA5_CITRI
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L1_008_064G1_scaffold_315_2
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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885..2267
DNA (1383bp) protein (461aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=909946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhimurium (strain 4/74).;"
ATP synthase subunit beta n=1 Tax=Escherichia coli UMNF18 RepID=G0F646_ECOLX
atpD; ATP synthase beta subunit
L1_008_064G1_scaffold_315_3
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2288..2707
DNA (420bp) protein (140aa)
ATP synthase epsilon chain n=2 Tax=Salmonella enteritidis RepID=L6N151_SALEN
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1192586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Enteritidis str.; 2009K0958.;"
atpC; ATP synthase F0F1 subunit epsilon
L1_008_064G1_scaffold_315_4
unknown

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2815..2919
DNA (105bp) protein (35aa)

This feature has no annotations

L1_008_064G1_scaffold_315_5
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3039..4409
DNA (1371bp) protein (457aa)
Bifunctional protein GlmU n=1 Tax=Citrobacter sp. 30_2 RepID=C1ME47_9ENTR
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
L1_008_064G1_scaffold_315_6
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4581..6410
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Enterobacter cloacae UCICRE 9 RepID=V3EXA5_ENTCL
L1_008_064G1_scaffold_315_7
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6479..7051
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQ65_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN86416.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_064G1_scaffold_315_8
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7325..8365
DNA (1041bp) protein (347aa)
Phosphate-binding protein PstS n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QMJ1_9ENTR
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
phosphate ABC transporter substrate-binding protein
L1_008_064G1_scaffold_315_9
Cronobacter dublinensis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8496..9455
DNA (960bp) protein (320aa)
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) n=1 Tax=Cronobacter dublinensis 582 RepID=K8B316_9ENTR
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) {ECO:0000313|EMBL:CCJ86973.1}; TaxID=1208661 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter dublinensis 582.;"
pstC; phosphate transporter permease subunit PstC
L1_008_064G1_scaffold_315_10
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9455..10342
DNA (888bp) protein (296aa)
Phosphate transporter permease subunit PtsA n=1 Tax=Enterobacter sp. R4-368 RepID=R9VMR9_9ENTR
pstA; phosphate transporter permease subunit PtsA
Phosphate transporter permease subunit PtsA {ECO:0000313|EMBL:AGN86414.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_064G1_scaffold_315_11
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10389..11162
DNA (774bp) protein (258aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R408_9ENTR
phosphate ABC transporter ATP-binding protein
L1_008_064G1_scaffold_315_12
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11299..11958
DNA (660bp) protein (220aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M900_ENTBF
phosphate uptake regulator, PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L1_008_064G1_scaffold_315_13
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12551..14164
DNA (1614bp) protein (538aa)
Cryptic outer membrane porin BglH n=1 Tax=Klebsiella oxytoca 10-5242 RepID=H3LF20_KLEOX
Porin {ECO:0000313|EMBL:EJU31128.1}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
maltoporin
L1_008_064G1_scaffold_315_14
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14216..15394
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YTY4_9ENTR
Glycoside hydrolase {ECO:0000313|EMBL:KDE35057.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L1_008_064G1_scaffold_315_15
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15433..16098)
DNA (666bp) protein (222aa)
Phosphatase YieH n=1 Tax=Enterobacter sp. MGH 34 RepID=V3ME95_9ENTR
6-phosphogluconate phosphatase {ECO:0000313|EMBL:KJP83468.1}; TaxID=61645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae.;"
HAD-superfamily hydrolase
L1_008_064G1_scaffold_315_16
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16267..17604
DNA (1338bp) protein (446aa)
adenine permease n=1 Tax=Enterobacter cloacae RepID=UPI00037D13C9
adenine permease PurP
Adenine permease PurP {ECO:0000313|EMBL:AHJ75958.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_315_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17697..18263)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNU2_9ENTR
hypothetical protein
Putative oxidoreductase {ECO:0000313|EMBL:CDL40700.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L1_008_064G1_scaffold_315_18
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18284..19030)
DNA (747bp) protein (249aa)
phosphopantetheinyl transferase n=1 Tax=Enterobacter cloacae RepID=UPI00030C3F21
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ75960.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_315_19
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19192..19875)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YKV6_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIX74655.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;"
L1_008_064G1_scaffold_315_20
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19872..21236)
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
tRNA modification GTPase MnmE n=3 Tax=Enterobacter RepID=G8LMQ2_ENTCL
mnmE; tRNA modification GTPase mnmE
L1_008_064G1_scaffold_315_21
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21340..22983)
DNA (1644bp) protein (548aa)
Membrane protein insertase YidC n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YWQ4_9ENTR
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
membrane protein OxaA
L1_008_064G1_scaffold_315_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23207..23533)
DNA (327bp) protein (109aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Ribonuclease P protein component n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z1K8_9ENTR
L1_008_064G1_scaffold_315_23
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23582..23722)
DNA (141bp) protein (47aa)
50S ribosomal protein L34 n=1826 Tax=cellular organisms RepID=RL34_ECO24
ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1463164 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. 07A044.;"
L1_008_064G1_scaffold_315_24
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24466..25725
DNA (1260bp) protein (420aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G7M9_ENTLS
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
L1_008_064G1_scaffold_315_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25730..26830
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
DNA polymerase III subunit beta n=1332 Tax=Bacteria RepID=DPO3B_ECO57
L1_008_064G1_scaffold_315_26
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26969..28042
DNA (1074bp) protein (358aa)
DNA replication and repair protein RecF n=1 Tax=Enterobacter cloacae EcWSU1 RepID=G8LES1_ENTCL
recF; DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1354030 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae P101.;"
L1_008_064G1_scaffold_315_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28071..28148
DNA (78bp) protein (26aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
DNA gyrase subunit B n=1 Tax=Escherichia coli UMEA 3159-1 RepID=T8UI27_ECOLX
Displaying 27 items

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