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L1_008_064G1_scaffold_328

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_328_1
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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262..966
DNA (705bp) protein (235aa)
GntR family transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQ92_9ENTR
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGN86446.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_064G1_scaffold_328_2
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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978..2369
DNA (1392bp) protein (464aa)
major facilitator transporter n=1 Tax=Enterobacter cloacae RepID=UPI0002D4AF77
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AHJ75923.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_328_3
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2372..3337)
DNA (966bp) protein (322aa)
LacI family transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VMV0_9ENTR
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AGN86444.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_064G1_scaffold_328_4
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3368..4297)
DNA (930bp) protein (310aa)
ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:AHJ75925.1}; EC=2.7.1.15 {ECO:0000313|EMBL:AHJ75925.1};; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
ribokinase n=1 Tax=Enterobacter cloacae RepID=UPI0002F111AD
L1_008_064G1_scaffold_328_5
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4403..5293)
DNA (891bp) protein (297aa)
D-ribose transporter subunit RbsB n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNZ9_9ENTR
D-ribose transporter subunit RbsB
D-ribose transporter subunit RbsB {ECO:0000313|EMBL:AGN86442.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_064G1_scaffold_328_6
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5320..6285)
DNA (966bp) protein (322aa)
Ribose ABC transporter permease n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQ86_9ENTR
rbsC; ribose ABC transporter permease
Ribose ABC transporter permease {ECO:0000313|EMBL:AGN86441.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_064G1_scaffold_328_7
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6291..7796)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ACQ5_CITK8
sugar ABC transporter ATP-binding protein
L1_008_064G1_scaffold_328_8
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7804..8223)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
D-ribose pyranase n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6RR49_ENTCL
D-ribose pyranase
L1_008_064G1_scaffold_328_9
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8427..10295)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R4B4_9ENTR
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
trkD; potassium transporter Kup
L1_008_064G1_scaffold_328_10
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10518..12014
DNA (1497bp) protein (499aa)
regulatory ATPase RavA n=1 Tax=Enterobacter cloacae RepID=UPI0002F9F1D0
ATPase
ATPase {ECO:0000313|EMBL:AHJ75930.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_328_11
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12008..13459
DNA (1452bp) protein (484aa)
Protein ViaA n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QMQ1_9ENTR
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L1_008_064G1_scaffold_328_12
Enterobacter sp. 35699, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13460..14452)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1619248 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35699.;"
Aspartate-ammonia ligase n=1 Tax=Enterobacter sp. MGH 24 RepID=V3PTN3_9ENTR
asparagine synthetase AsnA
L1_008_064G1_scaffold_328_13
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14603..15061
DNA (459bp) protein (153aa)
Transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=R9VMU0_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHJ75933.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_328_14
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15161..15610
DNA (450bp) protein (150aa)
FMN-binding protein MioC n=1 Tax=Enterobacter cloacae RepID=UPI0002F57CE0
FMN-binding protein MioC
FMN-binding protein MioC {ECO:0000313|EMBL:AHJ75934.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_064G1_scaffold_328_15
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15984..17873
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YWA8_9ENTR
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L1_008_064G1_scaffold_328_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17986..18609
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=RSMG_CITK8
16S rRNA methyltransferase {ECO:0000313|EMBL:AKE60750.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
gidB; 16S rRNA methyltransferase GidB
L1_008_064G1_scaffold_328_17
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19224..19604
DNA (381bp) protein (127aa)
atpI; ATP synthase protein I (EC:3.6.3.14)
ATP synthase protein I n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TH99_CITRI
ATP synthase accessory factor {ECO:0000313|EMBL:GAL59550.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
L1_008_064G1_scaffold_328_18
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19613..20431
DNA (819bp) protein (273aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J0J0_9ENTR
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
L1_008_064G1_scaffold_328_19
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20480..20719
DNA (240bp) protein (80aa)
ATP synthase subunit c n=27 Tax=Enterobacteriaceae RepID=ATPL_YERE8
atpE; Lipid-binding protein
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica.;"
L1_008_064G1_scaffold_328_20
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20779..21249
DNA (471bp) protein (157aa)
F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IYR0_9ENTR
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
L1_008_064G1_scaffold_328_21
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21264..21797
DNA (534bp) protein (178aa)
ATP synthase subunit delta n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R3R7_9ENTR
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
atpH; ATP synthase delta subunit
L1_008_064G1_scaffold_328_22
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21810..23351
DNA (1542bp) protein (514aa)
atpA; ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346, ECO:0000313|EMBL:CBG90709.1};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
ATP synthase subunit alpha n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THA4_CITRI
L1_008_064G1_scaffold_328_23
unknown

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23402..23467
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 23 items

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