ggKbase home page

L1_008_064G1_scaffold_331

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_331_1
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2..184)
DNA (183bp) protein (61aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Veillonella sp. ACP1 RepID=J5ANG6_9FIRM
ribulose-phosphate 3-epimerase
L1_008_064G1_scaffold_331_2
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(186..1049)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L8Q5_9FIRM
ribosome small subunit-dependent GTPase A
L1_008_064G1_scaffold_331_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1057..2982)
DNA (1926bp) protein (642aa)
Kinase domain protein n=1 Tax=Veillonella atypica KON RepID=L1PYW6_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EKY20888.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
serine/threonine protein kinase with PASTA sensor(s)
L1_008_064G1_scaffold_331_4
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3009..3710)
DNA (702bp) protein (234aa)
Protein phosphatase 2C n=3 Tax=Veillonella RepID=E1L8Q7_9FIRM
Phosphoprotein phosphatase {ECO:0000313|EMBL:EUB26607.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
protein serine/threonine phosphatase
L1_008_064G1_scaffold_331_5
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3703..4749)
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Veillonella sp. ACP1 RepID=J4QE07_9FIRM
radical SAM enzyme, Cfr family
L1_008_064G1_scaffold_331_6
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4780..6138)
DNA (1359bp) protein (453aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Veillonella sp. ACP1 RepID=J4RQ07_9FIRM
sun protein
L1_008_064G1_scaffold_331_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6122..6820)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3AUX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY20884.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
L1_008_064G1_scaffold_331_8
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6903..7877)
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Methionyl-tRNA formyltransferase n=1 Tax=Veillonella sp. ACP1 RepID=J4QD94_9FIRM
methionyl-tRNA formyltransferase
L1_008_064G1_scaffold_331_9
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7903..8391)
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Peptide deformylase n=3 Tax=Veillonella RepID=E1L8R2_9FIRM
peptide deformylase
L1_008_064G1_scaffold_331_10
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8404..10587)
DNA (2184bp) protein (728aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Primosomal protein N n=1 Tax=Veillonella sp. ACP1 RepID=J4QDG9_9FIRM
primosomal protein N'
L1_008_064G1_scaffold_331_11
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10676..11866)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
S-adenosylmethionine synthase n=4 Tax=Veillonella RepID=E1L8R4_9FIRM
S-adenosylmethionine synthetase
L1_008_064G1_scaffold_331_12
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12238..13440)
DNA (1203bp) protein (401aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFL58689.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFL58689.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFL58689.1};; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1L9K7_9FIRM
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L1_008_064G1_scaffold_331_13
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13495..13710)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
DNA-directed RNA polymerase subunit omega n=5 Tax=Veillonella RepID=E1L8R6_9FIRM
DNA-directed RNA polymerase subunit omega
L1_008_064G1_scaffold_331_14
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13715..14344)
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Guanylate kinase n=4 Tax=Veillonella RepID=E1L8R7_9FIRM
guanylate kinase
L1_008_064G1_scaffold_331_15
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14353..14622)
DNA (270bp) protein (90aa)
UPF0296 protein HMPREF9321_0143 n=5 Tax=Veillonella RepID=E1L8R8_9FIRM
UPF0296 protein HMPREF0870_00290 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
L1_008_064G1_scaffold_331_16
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14635..15516)
DNA (882bp) protein (294aa)
Putative flagellar protein FliS n=1 Tax=Veillonella atypica KON RepID=L1PZL9_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:EPD80105.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hypothetical protein
L1_008_064G1_scaffold_331_17
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15624..17342
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3AUW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD80104.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
fibronectin-binding A domain-containing protein
L1_008_064G1_scaffold_331_18
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17416..17880)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Veillonella atypica RepID=E1L8S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFL55196.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.;"
hypothetical protein
L1_008_064G1_scaffold_331_19
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17895..18404)
DNA (510bp) protein (170aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Veillonella atypica KON RepID=L1PZS9_9FIRM
pantetheine-phosphate adenylyltransferase
L1_008_064G1_scaffold_331_20
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18391..18942)
DNA (552bp) protein (184aa)
16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD {ECO:0000313|EMBL:EUB26512.1}; EC=2.1.1.171 {ECO:0000313|EMBL:EUB26512.1};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
RNA methyltransferase, RsmD family n=2 Tax=Veillonella RepID=E1L8S3_9FIRM
methyltransferase
L1_008_064G1_scaffold_331_21
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19012..20010)
DNA (999bp) protein (333aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Veillonella RepID=E1L8S4_9FIRM
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L1_008_064G1_scaffold_331_22
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20012..20605)
DNA (594bp) protein (198aa)
Glycerol-3-phosphate acyltransferase n=4 Tax=Veillonella RepID=E1L8S5_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
hypothetical protein
L1_008_064G1_scaffold_331_23
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20645..22009)
DNA (1365bp) protein (455aa)
GTPase Der n=3 Tax=Veillonella RepID=L1PYU6_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
small GTP-binding protein
L1_008_064G1_scaffold_331_24
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22095..23219)
DNA (1125bp) protein (375aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LDC8_9FIRM
hydroxymethylbutenyl pyrophosphate reductase
Displaying 24 items

View Taxonomy