ggKbase home page

L1_008_064G1_scaffold_382

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_382_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(271..1434)
DNA (1164bp) protein (388aa)
Carboxynorspermidine decarboxylase n=5 Tax=Bacteroides RepID=A6L641_BACV8
carboxynorspermidine decarboxylase
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EIY74922.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1467..3857)
DNA (2391bp) protein (797aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9TZH3_BACVU
helicase
L1_008_064G1_scaffold_382_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3966..4583
DNA (618bp) protein (206aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Superoxide dismutase n=6 Tax=Bacteroides RepID=A6L643_BACV8
superoxide dismutase
L1_008_064G1_scaffold_382_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4969..5169
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=6 Tax=Bacteroides RepID=C6Z1Y5_9BACE
ThiS protein, involved in thiamine biosynthesis
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EIY74925.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5159..5785
DNA (627bp) protein (209aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=5 Tax=Bacteroides RepID=C6Z1Y4_9BACE
L1_008_064G1_scaffold_382_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5803..6576
DNA (774bp) protein (258aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Thiazole synthase n=2 Tax=Bacteroides vulgatus RepID=D4VCL1_BACVU
thiG; thiazole synthase
L1_008_064G1_scaffold_382_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6585..8285
DNA (1701bp) protein (567aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Phosphomethylpyrimidine synthase n=2 Tax=Bacteroides RepID=D4VCL0_BACVU
thiamine biosynthesis protein ThiC
L1_008_064G1_scaffold_382_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8307..9392
DNA (1086bp) protein (362aa)
Flavodoxin-like protein n=2 Tax=Bacteroides RepID=D4VCK8_BACVU
Flavodoxin-like protein {ECO:0000313|EMBL:EFG16402.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
iron-sulfur protein
L1_008_064G1_scaffold_382_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9481..10611
DNA (1131bp) protein (377aa)
Thiamine biosynthesis protein ThiH n=8 Tax=root RepID=A6L650_BACV8
thiH; thiamine biosynthesis protein ThiH
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EOR96971.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_382_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10690..11382
DNA (693bp) protein (231aa)
Molybdopterin biosynthesis protein n=6 Tax=Bacteroides RepID=A6L651_BACV8
molybdopterin biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74932.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11495..12619)
DNA (1125bp) protein (375aa)
Glutathionylspermidine synthase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCK5_BACVU
Glutathionylspermidine synthase preATP-grasp family protein {ECO:0000313|EMBL:KDS31523.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glutathionylspermidine synthase
L1_008_064G1_scaffold_382_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12632..12985)
DNA (354bp) protein (118aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L653_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74934.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13205..13813
DNA (609bp) protein (203aa)
Thiamine phosphate pyrophosphorylase n=7 Tax=Bacteroides RepID=A6L654_BACV8
thiamine phosphate pyrophosphorylase
Uncharacterized protein {ECO:0000313|EMBL:EOR96975.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_382_14
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13978..14916
DNA (939bp) protein (313aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=7 Tax=Bacteroides RepID=A6L655_BACV8
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EFV68053.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_064G1_scaffold_382_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15046..16269)
DNA (1224bp) protein (408aa)
Putative ABC transport system, lipoprotein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L657_BACV8
ABC transporter lipoprotein
Putative ABC transport system, lipoprotein {ECO:0000313|EMBL:ABR41171.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_382_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16297..17088)
DNA (792bp) protein (264aa)
Putrescine transport system permease protein PotI n=7 Tax=Bacteroides RepID=A6L658_BACV8
putrescine transport system permease PotI
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KDS49430.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_382_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17082..17879)
DNA (798bp) protein (266aa)
Putrescine transport system permease protein PotH n=7 Tax=root RepID=A6L659_BACV8
putrescine transport system permease PotH
Uncharacterized protein {ECO:0000313|EMBL:EIY74939.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17892..19280)
DNA (1389bp) protein (463aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Polyamine ABC transporter ATP-binding protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P386_9BACE
spermidine/putrescine transport ATP-binding protein
L1_008_064G1_scaffold_382_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19782..20900
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P0S9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY74941.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
thiol:disulfide interchange protein
L1_008_064G1_scaffold_382_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20936..21100
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UM90_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY74942.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21127..23691)
DNA (2565bp) protein (855aa)
Alpha-glucan phosphorylases family protein {ECO:0000313|EMBL:KDS49424.1}; EC=2.4.1.1 {ECO:0000313|EMBL:KDS49424.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Glycosyltransferase family 35, candidate alpha-glucan phosphorylase n=6 Tax=Bacteroides RepID=A6L663_BACV8
glycosyltransferase family alpha-glucan phosphorylase
L1_008_064G1_scaffold_382_22
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23720..25390)
DNA (1671bp) protein (557aa)
Glycosyltransferase family 3, candidate alpha-glycosyltransferase n=7 Tax=Bacteroides RepID=A6L664_BACV8
glycosyltransferase family alpha-glycosyltransferase
Glycosyltransferase family 3 {ECO:0000313|EMBL:EFV68060.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_064G1_scaffold_382_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25644..26108)
DNA (465bp) protein (155aa)
V-type ATP synthase subunit K n=14 Tax=Bacteroides RepID=A6L665_BACV8
ATP synthase subunit K
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:EOR96985.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_382_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26322..28127)
DNA (1806bp) protein (602aa)
V-type ATPase 116kDa subunit family protein n=7 Tax=Bacteroides RepID=C6Z1W4_9BACE
V-type ATP synthase subunit I
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_382_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28124..28729)
DNA (606bp) protein (202aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=7 Tax=Bacteroides RepID=A6L667_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EIY74947.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28744..30066)
DNA (1323bp) protein (441aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase subunit B n=7 Tax=Bacteroides RepID=A6L668_BACV8
V-type ATP synthase subunit B {ECO:0000313|EMBL:CDF19042.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_064G1_scaffold_382_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30102..31856)
DNA (1755bp) protein (585aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
ATP synthase alpha/beta family, nucleotide-binding domain protein n=5 Tax=Bacteroides RepID=D4V4F3_BACVU
ATP synthase subunit A
L1_008_064G1_scaffold_382_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31875..32711)
DNA (837bp) protein (279aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L670_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74950.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_382_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32721..33311)
DNA (591bp) protein (197aa)
V-type ATP synthase subunit E n=11 Tax=Bacteroides RepID=E5US44_9BACE
ATP synthase subunit E
V-type H+-transporting ATPase subunit E {ECO:0000313|EMBL:EOR96991.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 29 items

View Taxonomy