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L1_008_064G1_scaffold_522

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_522_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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55..360
DNA (306bp) protein (102aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L4Q5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY73523.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_522_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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414..926
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IG71_9BACE
Holliday junction resolvase
L1_008_064G1_scaffold_522_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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931..2925
DNA (1995bp) protein (665aa)
Pullulanase, type I n=3 Tax=Bacteroides RepID=I8ZDE8_BACVU
Pullulanase, type I {ECO:0000313|EMBL:EOS05028.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
pullulanase
L1_008_064G1_scaffold_522_4
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2983..3090
DNA (108bp) protein (36aa)
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Mannonate dehydratase n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IAC7_9BACE
L1_008_064G1_scaffold_522_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3159..4025
DNA (867bp) protein (289aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=3 Tax=Bacteroides RepID=C6Z9S9_9BACE
L1_008_064G1_scaffold_522_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4008..6218)
DNA (2211bp) protein (737aa)
Phospholipase, patatin family n=3 Tax=Bacteroides vulgatus RepID=D4VDH8_BACVU
NTE family protein {ECO:0000313|EMBL:EOS05030.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
patatin-like phospholipase
L1_008_064G1_scaffold_522_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6426..6914
DNA (489bp) protein (163aa)
Exonuclease n=7 Tax=Bacteroides RepID=D4VDH7_BACVU
exonuclease/DNA polymerase III epsilon c
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOS05031.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_522_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6948..7550
DNA (603bp) protein (201aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R1_BACV8
hypothetical protein
Uncharacterized protein, YigZ family {ECO:0000313|EMBL:EFG16168.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_064G1_scaffold_522_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7741..8754
DNA (1014bp) protein (338aa)
Phosphate-selective porin O and P n=3 Tax=root RepID=C6Z9S5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68454.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
porin
L1_008_064G1_scaffold_522_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8921..10954)
DNA (2034bp) protein (678aa)
UvrABC system protein B n=5 Tax=Bacteroides RepID=A6L4R3_BACV8
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_008_064G1_scaffold_522_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11120..11956
DNA (837bp) protein (279aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L4R4_BACV8
membrane protein
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:CDF18584.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_064G1_scaffold_522_12
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11973..12308
DNA (336bp) protein (112aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A6L4R5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ19315.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L1_008_064G1_scaffold_522_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12558..13010
DNA (453bp) protein (151aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY73534.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_522_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13094..13777)
DNA (684bp) protein (228aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05038.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_522_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13777..15387)
DNA (1611bp) protein (537aa)
LysM-repeat domain-containing protein n=4 Tax=Bacteroides RepID=A6L4R8_BACV8
LysM repeat-containing protein
LysM-repeat domain-containing protein {ECO:0000313|EMBL:CDF18588.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_064G1_scaffold_522_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15542..16384
DNA (843bp) protein (281aa)
Excinuclease ABC subunit A n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYN8_9BACE
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_064G1_scaffold_522_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16422..18227
DNA (1806bp) protein (602aa)
Excinuclease ABC subunit A n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYN8_9BACE
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
excinuclease ABC subunit A
L1_008_064G1_scaffold_522_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18242..18727
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=6 Tax=Bacteroides RepID=C6Z9R7_9BACE
transcriptional regulator
L1_008_064G1_scaffold_522_19
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18834..19454
DNA (621bp) protein (207aa)
Amino acid/peptide transporter n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R4E3_9BACE
H+/peptide symporter
H+/peptide symporter {ECO:0000313|EMBL:EFV68463.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_064G1_scaffold_522_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19579..20328
DNA (750bp) protein (250aa)
Amino acid/peptide transporter n=3 Tax=Bacteroides RepID=C6Z9R6_9BACE
Amino acid/peptide transporter {ECO:0000313|EMBL:EET17625.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
major facilitator transporter
L1_008_064G1_scaffold_522_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20391..21011)
DNA (621bp) protein (207aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=R6ILN1_9BACE
surface protein
Uncharacterized protein {ECO:0000313|EMBL:KDS53833.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_064G1_scaffold_522_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21008..21286)
DNA (279bp) protein (93aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L4S3_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05044.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 22 items

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