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L1_008_064G1_scaffold_539

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_539_1
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(622..1266)
DNA (645bp) protein (215aa)
UPI0003D62A7D related cluster n=1 Tax=unknown RepID=UPI0003D62A7D
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ETJ15179.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
major facilitator superfamily protein
L1_008_064G1_scaffold_539_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1453..2349)
DNA (897bp) protein (299aa)
UPI0003D5CB9B related cluster n=1 Tax=unknown RepID=UPI0003D5CB9B
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
protein-export membrane protein SecF
L1_008_064G1_scaffold_539_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2346..3620)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecD n=3 Tax=Veillonella parvula RepID=T0T7B8_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
protein-export membrane protein SecD
L1_008_064G1_scaffold_539_4
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3642..4208)
DNA (567bp) protein (189aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D6938C related cluster n=1 Tax=unknown RepID=UPI0003D6938C
5-formyltetrahydrofolate cyclo-ligase
L1_008_064G1_scaffold_539_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4208..4498)
DNA (291bp) protein (97aa)
Preprotein translocase, YajC subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRS2_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EEP65067.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
preprotein translocase subunit YajC
L1_008_064G1_scaffold_539_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4576..5691)
DNA (1116bp) protein (372aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLM1_VEIPT
queuine tRNA-ribosyltransferase
L1_008_064G1_scaffold_539_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5700..6725)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRS0_9FIRM
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L1_008_064G1_scaffold_539_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6737..8338)
DNA (1602bp) protein (534aa)
SpoIID/LytB domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR9_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:EEP65064.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
SpoIID/LytB domain-containing protein
L1_008_064G1_scaffold_539_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8341..9345)
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR8_9FIRM
Holliday junction DNA helicase RuvB
L1_008_064G1_scaffold_539_10
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9348..9956)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D64493 related cluster n=1 Tax=unknown RepID=UPI0003D64493
Holliday junction DNA helicase RuvA
L1_008_064G1_scaffold_539_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9956..10450)
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR6_9FIRM
crossover junction endodeoxyribonuclease RuvC
L1_008_064G1_scaffold_539_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10654..11391)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein VEIDISOL_01604 n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FRR5_9FIRM
Probable transcriptional regulatory protein VEIDISOL_01604 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
hypothetical protein
L1_008_064G1_scaffold_539_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11401..11526)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Veillonella atypica KON RepID=L1PTU5_9FIRM
hypothetical protein
tRNA (Guanine-N1)-methyltransferase {ECO:0000313|EMBL:ETI99060.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Displaying 13 items

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