ggKbase home page

L1_008_064G1_scaffold_655

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_655_1

Not on your lists

comp(1..498)
DNA (498bp) protein (166aa)
Uncharacterized protein n=7 Tax=root RepID=C6IU49_9BACE
Conjugative transposon protein TraI {ECO:0000313|EMBL:EJX07757.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
conjugative transposon protein TraI
L1_008_064G1_scaffold_655_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(522..902)
DNA (381bp) protein (127aa)
Uncharacterized protein n=4 Tax=root RepID=C7X4E7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52767.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
putative lipoprotein
L1_008_064G1_scaffold_655_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(932..3442)
DNA (2511bp) protein (837aa)
TraG family conjugation system ATPase n=3 Tax=root RepID=U6RAQ0_9BACE
Conjugation system ATPase, TraG family protein {ECO:0000313|EMBL:EXY76484.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Domain of unknown function DUF87.
L1_008_064G1_scaffold_655_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3439..3771)
DNA (333bp) protein (111aa)
Conjugative transposon protein TraF n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VR88_BACFG
Conjugative transposon protein TraF {ECO:0000313|EMBL:EFR52095.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
conjugal transfer protein TraF
L1_008_064G1_scaffold_655_5
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3782..4093)
DNA (312bp) protein (104aa)
Conjugative transposon protein TraE n=4 Tax=Bacteroidetes RepID=G8UJ81_TANFA
conjugative transposon protein TraE
Conjugative transposon protein TraE {ECO:0000313|EMBL:AEW21096.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
L1_008_064G1_scaffold_655_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4292..5032)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB6_9PORP
Putative traD {ECO:0000313|EMBL:EXY76487.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
conjugal transfer protein TraD
L1_008_064G1_scaffold_655_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5029..5391)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EXY76488.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L1_008_064G1_scaffold_655_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5418..5867)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EXY76489.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Conjugative transposon protein TraB
L1_008_064G1_scaffold_655_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5873..6628)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEB9_9PORP
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EXY76490.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Conjugative transposon protein TraA
L1_008_064G1_scaffold_655_10
Prevotella multiformis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7312..7737
DNA (426bp) protein (142aa)
Uncharacterized protein n=8 Tax=Bacteroidetes RepID=S8FG96_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGC19642.1}; TaxID=888743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multiformis DSM 16608.;"
L1_008_064G1_scaffold_655_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7716..8966
DNA (1251bp) protein (417aa)
Relaxase/mobilization nuclease domain protein n=2 Tax=Bacteroides RepID=D1K7U8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB47227.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
Relaxase/Mobilisation nuclease domain.
L1_008_064G1_scaffold_655_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8999..9094
DNA (96bp) protein (32aa)
TraG family protein n=3 Tax=Bacteroidetes RepID=G8UJ74_TANFA
conjugal transfer protein TraG
Putative uncharacterized protein {ECO:0000313|EMBL:EEB25834.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Displaying 12 items

View Taxonomy