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L1_008_064G1_scaffold_662

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_662_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..372)
DNA (372bp) protein (124aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HWG8_9BACE
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR40233.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_064G1_scaffold_662_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(646..1092)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05499.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_662_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1104..1481)
DNA (378bp) protein (126aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3PZH4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05500.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_662_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1526..2077)
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=5 Tax=Bacteroides RepID=C6Z642_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFV66645.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
RNA polymerase sigma70 factor
L1_008_064G1_scaffold_662_5
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2111..2938)
DNA (828bp) protein (276aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Ribonuclease Z n=14 Tax=root RepID=B6W2P0_9BACE
ribonuclease Z
L1_008_064G1_scaffold_662_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3111..3557)
DNA (447bp) protein (149aa)
Cold-shock DNA-binding domain protein n=7 Tax=Bacteroides RepID=C6Z644_9BACE
cold shock protein, DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_662_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3807..5603)
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=6 Tax=Bacteroides RepID=A6L3H5_BACV8
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:AII62724.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L1_008_064G1_scaffold_662_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5637..5774)
DNA (138bp) protein (46aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UML6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82596.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_662_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5847..7409
DNA (1563bp) protein (521aa)
Two-component system sensor histidine kinase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P093_9BACE
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CDF18376.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
putative two-component system sensor kinase/response regulator fusion protein
L1_008_064G1_scaffold_662_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7406..8107)
DNA (702bp) protein (234aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82594.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_662_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8111..8947)
DNA (837bp) protein (279aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEA9_BACVU
murQ; N-acetylmuramic acid 6-phosphate etherase
L1_008_064G1_scaffold_662_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8944..9783)
DNA (840bp) protein (280aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z649_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16358.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_008_064G1_scaffold_662_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9939..10724)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HWG1_BACVU
Response regulator {ECO:0000313|EMBL:KDS56694.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system response regulator
L1_008_064G1_scaffold_662_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10717..11475)
DNA (759bp) protein (253aa)
Histidine kinase n=7 Tax=Bacteroides RepID=C6Z651_9BACE
two-component system sensor kinase
Uncharacterized protein {ECO:0000313|EMBL:EOS05511.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_064G1_scaffold_662_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11447..11761)
DNA (315bp) protein (105aa)
Histidine kinase n=7 Tax=Bacteroides RepID=C6Z651_9BACE
Histidine kinase {ECO:0000313|EMBL:EET16360.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor kinase
L1_008_064G1_scaffold_662_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11878..12390)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HNA3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS05512.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_064G1_scaffold_662_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12421..12516)
DNA (96bp) protein (32aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z652_9BACE
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS56692.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_008_064G1_scaffold_662_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12529..13161)
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3I2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66656.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_064G1_scaffold_662_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13187..13744)
DNA (558bp) protein (186aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3I3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82586.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_064G1_scaffold_662_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13978..14532)
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3I4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18384.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_064G1_scaffold_662_21
unknown

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14627..14692
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 21 items

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