ggKbase home page

L1_008_064G1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_129_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(126..266)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW71_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13573.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_064G1_scaffold_129_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(275..1759)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW72_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13574.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_064G1_scaffold_129_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1795..2799)
DNA (1005bp) protein (335aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW73_BACSE
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDS13575.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
arabinan endo-1,5-alpha-L-arabinosidase A
L1_008_064G1_scaffold_129_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2789..2902)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V684_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO53082.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L1_008_064G1_scaffold_129_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2929..5256)
DNA (2328bp) protein (776aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW74_BACSE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDS13576.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
alpha-1,2-mannosidase
L1_008_064G1_scaffold_129_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5256..7748)
DNA (2493bp) protein (831aa)
L-glutaminase (EC:3.5.1.2)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW75_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13577.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_064G1_scaffold_129_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7807..9987)
DNA (2181bp) protein (727aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW76_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13579.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_064G1_scaffold_129_8
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10104..10919)
DNA (816bp) protein (272aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V680_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV25856.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L1_008_064G1_scaffold_129_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10948..13014)
DNA (2067bp) protein (689aa)
SusD family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW79_BACSE
SusD family protein {ECO:0000313|EMBL:EDS13581.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
SusD family.
L1_008_064G1_scaffold_129_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13045..16215)
DNA (3171bp) protein (1057aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW80_BACSE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS13582.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
L1_008_064G1_scaffold_129_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16234..17679)
DNA (1446bp) protein (482aa)
Glycosyl hydrolase family 76 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW81_BACSE
Glycosyl hydrolase family 76 {ECO:0000313|EMBL:EDS13583.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
glycosyl hydrolase
L1_008_064G1_scaffold_129_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17781..19622)
DNA (1842bp) protein (614aa)
Cna protein B-type domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW82_BACSE
Cna protein B-type domain protein {ECO:0000313|EMBL:EDS13584.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_064G1_scaffold_129_13
unknown

Not on your lists

comp(19634..19780)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_064G1_scaffold_129_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20147..22681)
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW83_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13585.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
DNA-binding transcriptional activator
L1_008_064G1_scaffold_129_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23676..24035)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW87_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13589.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Cellulase
L1_008_064G1_scaffold_129_16
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24047..24265)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW88_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13590.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Cellulase
L1_008_064G1_scaffold_129_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24510..24845)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW90_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13592.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
cellulase
L1_008_064G1_scaffold_129_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25475..26575
DNA (1101bp) protein (367aa)
Phosphate-selective porin O and P n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW93_BACSE
Phosphate-selective porin O and P {ECO:0000313|EMBL:EDS13595.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
phosphate-selective porin O and P
L1_008_064G1_scaffold_129_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26612..27463
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW94_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13596.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_064G1_scaffold_129_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27567..28925
DNA (1359bp) protein (453aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NW95_BACSE
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDS13597.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
glycoside hydrolase family 28
L1_008_064G1_scaffold_129_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28926..29945)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCR5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20799.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
metallophosphoesterase
L1_008_064G1_scaffold_129_22
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29976..30455)
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Bacteroides RepID=B0NWB1_BACSE
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L1_008_064G1_scaffold_129_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30613..31230)
DNA (618bp) protein (206aa)
FAH family protein n=2 Tax=Bacteroides stercoris RepID=B0NWB2_BACSE
FAH family protein {ECO:0000313|EMBL:EDS13614.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
fumarylacetoacetate (FAA) hydrolase
L1_008_064G1_scaffold_129_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31230..31886)
DNA (657bp) protein (219aa)
Redox-sensing transcriptional repressor Rex n=3 Tax=Bacteroides RepID=B0NWB3_BACSE
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
CoA-binding domain protein
L1_008_064G1_scaffold_129_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32056..32415
DNA (360bp) protein (120aa)
Translation initiation factor 1 n=2 Tax=Bacteroides stercoris RepID=S3YT69_BACSE
Putative translation initiation factor SUI1 {ECO:0000313|EMBL:EDS13616.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative translation initiation factor SUI1
L1_008_064G1_scaffold_129_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32506..33498)
DNA (993bp) protein (331aa)
Elongation factor Ts n=3 Tax=Bacteroides RepID=B0NWB5_BACSE
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
translation elongation factor Ts (EF-Ts)
L1_008_064G1_scaffold_129_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33625..34461)
DNA (837bp) protein (279aa)
30S ribosomal protein S2 n=4 Tax=Bacteroides RepID=B0NWB6_BACSE
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
30S ribosomal protein S2
L1_008_064G1_scaffold_129_28
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(34639..35025)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=6 Tax=Bacteroides RepID=B0NWB7_BACSE
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
30S ribosomal protein S9
L1_008_064G1_scaffold_129_29
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(35032..35493)
DNA (462bp) protein (154aa)
50S ribosomal protein L13 n=2 Tax=Bacteroides RepID=R6B1H2_9BACE
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
50S ribosomal protein L13
L1_008_064G1_scaffold_129_30
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35521..35820)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PL17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF50137.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy