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L1_008_064G1_scaffold_340

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_064G1_scaffold_340_1
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7..351)
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=10 Tax=Bacteroides RepID=A7UZR4_BACUN
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
50S ribosomal protein L18
L1_008_064G1_scaffold_340_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(372..941)
DNA (570bp) protein (190aa)
50S ribosomal protein L6 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NTC4_BACSE
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
rplF; putative 50S ribosomal protein L6
L1_008_064G1_scaffold_340_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(957..1352)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=2 Tax=Bacteroides stercoris RepID=B0NTC5_BACSE
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
30S ribosomal protein S8
L1_008_064G1_scaffold_340_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1408..1707)
DNA (300bp) protein (100aa)
30S ribosomal protein S14 n=3 Tax=Bacteroides RepID=B0NTC6_BACSE
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
rpsN; putative 30S ribosomal protein S14
L1_008_064G1_scaffold_340_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1712..2269)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=6 Tax=Bacteroides RepID=B0NTC7_BACSE
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_064G1_scaffold_340_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2269..2589)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=3 Tax=Bacteroides RepID=B0NTC8_BACSE
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
50S ribosomal protein L24
L1_008_064G1_scaffold_340_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2610..2975)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=4 Tax=Bacteroides RepID=E6SRD2_BACT6
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L1_008_064G1_scaffold_340_8
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2978..3235)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=3 Tax=Bacteroides RepID=B0NTD0_BACSE
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
rpsQ; 30S ribosomal protein S17
L1_008_064G1_scaffold_340_9
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3244..3441)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=3 Tax=Bacteroides RepID=B0NTD1_BACSE
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
50S ribosomal protein L29
L1_008_064G1_scaffold_340_10

Not on your lists


comp(3447..3881)
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=4 Tax=root RepID=B0NTD2_BACSE
50S ribosomal protein L16 {ECO:0000313|EMBL:EJX09356.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
50S ribosomal protein L16
L1_008_064G1_scaffold_340_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3903..4634)
DNA (732bp) protein (244aa)
30S ribosomal protein S3 n=3 Tax=Bacteroides RepID=B0NTD3_BACSE
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
30S ribosomal protein S3
L1_008_064G1_scaffold_340_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4640..5050)
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=28 Tax=Bacteroides RepID=RL22_BACFN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
50S ribosomal protein L22
L1_008_064G1_scaffold_340_13
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5087..5356)
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=32 Tax=root RepID=RS19_BACV8
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
L1_008_064G1_scaffold_340_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5377..6201)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=2 Tax=Bacteroides stercoris RepID=B0NTD6_BACSE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
50S ribosomal protein L2
L1_008_064G1_scaffold_340_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6207..6500)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=2 Tax=Bacteroides stercoris RepID=B0NTD7_BACSE
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
50S ribosomal protein L23
L1_008_064G1_scaffold_340_16
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6517..7143)
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJE6_9BACE
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
50S ribosomal protein L4
L1_008_064G1_scaffold_340_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7143..7760)
DNA (618bp) protein (206aa)
50S ribosomal protein L3 n=2 Tax=Bacteroides stercoris RepID=B0NTD9_BACSE
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
50S ribosomal protein L3P
L1_008_064G1_scaffold_340_18

Not on your lists


comp(7780..8085)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=15 Tax=root RepID=E6SRC1_BACT6
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000313|EMBL:EJX09645.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L1_008_064G1_scaffold_340_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8176..10293)
DNA (2118bp) protein (706aa)
Elongation factor G n=2 Tax=Bacteroides stercoris RepID=B0NTE1_BACSE
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
fusA; putative translation elongation factor G
L1_008_064G1_scaffold_340_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10350..10826)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=3 Tax=Bacteroides RepID=B0NTE2_BACSE
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
30S ribosomal protein S7
L1_008_064G1_scaffold_340_21
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10981..11382)
DNA (402bp) protein (134aa)
30S ribosomal protein S12 n=6 Tax=Bacteroides RepID=B0NTE3_BACSE
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
30S ribosomal protein S12
L1_008_064G1_scaffold_340_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11499..11810)
DNA (312bp) protein (104aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NTE4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14361.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_008_064G1_scaffold_340_23
unknown

Not on your lists

comp(11825..12091)
DNA (267bp) protein (89aa)

This feature has no annotations

L1_008_064G1_scaffold_340_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12238..16533)
DNA (4296bp) protein (1432aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Bacteroides stercoris RepID=B0NTE5_BACSE
L1_008_064G1_scaffold_340_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16647..20459)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZMN5_BACSE
L1_008_064G1_scaffold_340_26
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20565..20942)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=13 Tax=root RepID=A7UZT9_BACUN
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
50S ribosomal protein L12
L1_008_064G1_scaffold_340_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21003..21524)
DNA (522bp) protein (174aa)
Ribosomal protein L10 n=2 Tax=Bacteroides stercoris RepID=B0NTE8_BACSE
Ribosomal protein L10 {ECO:0000313|EMBL:EDS14365.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
50S ribosomal protein L10
L1_008_064G1_scaffold_340_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21540..22238)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Bacteroides stercoris RepID=B0NTE9_BACSE
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
50S ribosomal protein L1
L1_008_064G1_scaffold_340_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(22254..22499)
DNA (246bp) protein (82aa)
50S ribosomal protein L11 n=8 Tax=Bacteroides RepID=B0NTF0_BACSE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
rplK; putative 50S ribosomal protein L11
Displaying 29 items

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