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L1_008_092G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 210 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_18_1
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(76..735)
DNA (660bp) protein (220aa)
Putative exported protein n=5 Tax=Erwinia amylovora RepID=D4IDK2_ERWAE
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:CBX80764.1}; TaxID=889211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia amylovora ATCC BAA-2158.;"
L1_008_092G1_scaffold_18_2
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(778..1188)
DNA (411bp) protein (137aa)
Exported protein n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S6R5_ENTAL
exported protein
Exported protein {ECO:0000313|EMBL:AEN62773.1}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
L1_008_092G1_scaffold_18_3
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1212..1415)
DNA (204bp) protein (68aa)
Putative lipoprotein n=1 Tax=Erwinia amylovora ATCC BAA-2158 RepID=E5B5U4_ERWAM
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:CBX80764.1}; TaxID=889211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia amylovora ATCC BAA-2158.;"
L1_008_092G1_scaffold_18_4
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1412..3265)
DNA (1854bp) protein (618aa)
Putative uncharacterized protein n=1 Tax=Erwinia amylovora ATCC BAA-2158 RepID=E5B5K8_ERWAM
Putative uncharacterized protein {ECO:0000313|EMBL:CBX80761.1}; TaxID=889211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia amylovora ATCC BAA-2158.;"
hypothetical protein
L1_008_092G1_scaffold_18_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3520..5106)
DNA (1587bp) protein (529aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILI6_9ENTR
Chemotaxis protein {ECO:0000313|EMBL:KDE38278.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
chemotaxis protein
L1_008_092G1_scaffold_18_6
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..6603)
DNA (1239bp) protein (413aa)
diguanylate phosphodiesterase n=1 Tax=Enterobacter cloacae RepID=UPI0002F13494
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AHJ73993.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_092G1_scaffold_18_7
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6797..7300)
DNA (504bp) protein (168aa)
NifQ family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QPZ3_9ENTR
Iron-molybdenum cofactor biosynthesis protein NifQ {ECO:0000313|EMBL:KDE38276.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
iron-molybdenum cofactor biosynthesis protein NifQ
L1_008_092G1_scaffold_18_8
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7297..8697)
DNA (1401bp) protein (467aa)
Nitrogenase cofactor biosynthesis protein NifB n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKB4_9ENTR
NifB protein {ECO:0000313|EMBL:KIS41983.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
FeMo cofactor biosynthesis protein NifB
L1_008_092G1_scaffold_18_9
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8865..10436)
DNA (1572bp) protein (524aa)
Nif-specific regulatory protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q8Y4_9ENTR
NifA protein {ECO:0000313|EMBL:KIS45476.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
ATPase AAA
L1_008_092G1_scaffold_18_10
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10433..11920)
DNA (1488bp) protein (496aa)
Nitrogen fixation negative regulator NifL n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILJ2_9ENTR
NifL protein {ECO:0000313|EMBL:KIS42585.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
nitrogen fixation regulatory protein
L1_008_092G1_scaffold_18_11
Dickeya chrysanthemi, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12279..12809
DNA (531bp) protein (177aa)
Flavodoxin n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SHZ6_DICD3
flavodoxin
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia; chrysanthemi).;"
L1_008_092G1_scaffold_18_12
unknown

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12911..13090
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_092G1_scaffold_18_13
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13158..13952)
DNA (795bp) protein (265aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
Nitrogen fixation protein NifM n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QPZ6_9ENTR
peptidylprolyl isomerase
L1_008_092G1_scaffold_18_14
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13949..14392)
DNA (444bp) protein (148aa)
NifZ domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKB9_9ENTR
NifZ domain protein {ECO:0000313|EMBL:EJI87727.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
protein NifZ
L1_008_092G1_scaffold_18_15
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14389..14646)
DNA (258bp) protein (86aa)
Nitrogen fixation NifW family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q8Z0_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS41645.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
nitrogen fixation protein NifW
L1_008_092G1_scaffold_18_16
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14649..15791)
DNA (1143bp) protein (381aa)
Homocitrate synthase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILJ7_9ENTR
Homocitrate synthase {ECO:0000313|EMBL:KDE38268.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
homocitrate synthase
L1_008_092G1_scaffold_18_17
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15804..17006)
DNA (1203bp) protein (401aa)
Cysteine desulfurase NifS {ECO:0000313|EMBL:EJI87730.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EJI87730.1};; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
Cysteine desulfurase NifS n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YI71_9ENTR
cysteine desulfurase
L1_008_092G1_scaffold_18_18
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17041..17868)
DNA (828bp) protein (276aa)
Nitrogen fixation protein NifU n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QQ00_9ENTR
Nitrogen fixation protein NifU {ECO:0000256|PIRNR:PIRNR000375}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
nitrogen fixation protein NifU
L1_008_092G1_scaffold_18_19
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18067..18531)
DNA (465bp) protein (155aa)
Dinitrogenase iron-molybdenum cofactor family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKC4_9ENTR
Dinitrogenase iron-molybdenum cofactor family protein {ECO:0000313|EMBL:EJI87732.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
nitrogen fixation protein NifX
L1_008_092G1_scaffold_18_20
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18518..19900)
DNA (1383bp) protein (461aa)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q8Z4_9ENTR
NifN protein {ECO:0000313|EMBL:KIS43341.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
L1_008_092G1_scaffold_18_21
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19911..21284)
DNA (1374bp) protein (458aa)
NifE n=1 Tax=Enterobacter sp. R4-368 RepID=R9VGY6_9ENTR
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
NifE {ECO:0000313|EMBL:AGV01056.1}; Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE {ECO:0000313|EMBL:AGN84239.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_092G1_scaffold_18_22
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21462..22121)
DNA (660bp) protein (220aa)
Nitrogenase FeMo-cofactor carrier protein NifX n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2MIE1_9ENTR
Protein NifY {ECO:0000313|EMBL:KDE38262.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
Dinitrogenase iron-molybdenum cofactor biosynthesis protein
L1_008_092G1_scaffold_18_23
Pantoea sp. AS-PWVM4, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22118..22351)
DNA (234bp) protein (78aa)
NifT protein n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2NQW2_9ENTR
NifT protein {ECO:0000313|EMBL:ERK16330.1}; TaxID=1332069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. AS-PWVM4.;"
protein nifT
L1_008_092G1_scaffold_18_24
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22395..23957)
DNA (1563bp) protein (521aa)
NifK protein {ECO:0000313|EMBL:KIS44929.1}; EC=1.18.6.1 {ECO:0000313|EMBL:KIS44929.1};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
nitrogenase molybdenum-iron protein beta chain n=1 Tax=Enterobacter cloacae RepID=UPI00031F5F7D
nitrogenase molybdenum-iron protein subunit beta
L1_008_092G1_scaffold_18_25
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24013..25461)
DNA (1449bp) protein (483aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Nitrogenase protein alpha chain n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q8Z9_9ENTR
nitrogenase molybdenum-iron protein subunit alpha
L1_008_092G1_scaffold_18_26
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25487..26368)
DNA (882bp) protein (294aa)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
nitrogenase reductase n=1 Tax=Enterobacter cloacae RepID=UPI0002EDAFDF
nifH; nitrogenase reductase
L1_008_092G1_scaffold_18_27
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26783..30295
DNA (3513bp) protein (1171aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QQ09_9ENTR
Pyruvate-flavodoxin oxidoreductase
L1_008_092G1_scaffold_18_28
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30383..31855)
DNA (1473bp) protein (491aa)
Amidase family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILL4_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44356.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
amidase
L1_008_092G1_scaffold_18_29
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31852..33198)
DNA (1347bp) protein (449aa)
Major Facilitator Superfamily protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YI82_9ENTR
Major facilitator transporter {ECO:0000313|EMBL:KDE38254.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
major facilitator transporter
L1_008_092G1_scaffold_18_30
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33685..34602
DNA (918bp) protein (306aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QQ13_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS42968.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
transcriptional regulator, LysR family
Displaying items 1-30 of 210 in total

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