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L1_008_092G1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_37_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(62..1045)
DNA (984bp) protein (328aa)
Integral membrane protein, TerC family n=2 Tax=Bifidobacterium dentium RepID=E0Q775_9BIFI
Integral membrane protein, TerC family {ECO:0000313|EMBL:ETO97855.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
terC; integral membrane protein TerC
L1_008_092G1_scaffold_37_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1085..3196)
DNA (2112bp) protein (704aa)
UvrABC system protein B n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q776_9BIFI
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
uvrb; excinuclease ABC subunit B
L1_008_092G1_scaffold_37_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3202..3918)
DNA (717bp) protein (239aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q777_9BIFI
L1_008_092G1_scaffold_37_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4029..5501)
DNA (1473bp) protein (491aa)
rpsA; 30S ribosomal protein S1 (EC:1.17.1.2)
30S ribosomal protein S1 n=4 Tax=Bifidobacterium dentium RepID=D2Q9R8_BIFDB
Putative ribosomal protein S1 {ECO:0000313|EMBL:EFM41593.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_37_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5657..6532)
DNA (876bp) protein (292aa)
bifunctional methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=2 Tax=Bifidobacterium dentium RepID=E0Q779_9BIFI
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_37_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6674..7720
DNA (1047bp) protein (349aa)
ABC transporter, substrate-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q780_9BIFI
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EFM41595.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter substrate-binding protein
L1_008_092G1_scaffold_37_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7860..8747
DNA (888bp) protein (296aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM41596.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM41596.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q781_9BIFI
L1_008_092G1_scaffold_37_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8744..9580
DNA (837bp) protein (279aa)
ABC transporter permease n=4 Tax=Bifidobacterium dentium RepID=D2Q9R4_BIFDB
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:ADB09550.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_37_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9583..10059)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q783_9BIFI
L1_008_092G1_scaffold_37_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10069..10665)
DNA (597bp) protein (199aa)
CarD family transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q9R2_BIFDB
CarD family transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:EFM41599.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_37_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10803..13058
DNA (2256bp) protein (752aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
1,4-alpha-glucan branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Bifidobacterium dentium RepID=E0Q785_9BIFI
L1_008_092G1_scaffold_37_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13074..13796
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q786_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26846.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
chemotaxis protein CheY
L1_008_092G1_scaffold_37_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13808..14884
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q787_9BIFI
L1_008_092G1_scaffold_37_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14863..15582)
DNA (720bp) protein (240aa)
Phosphoribosyl transferase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q788_9BIFI
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EFM41603.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_092G1_scaffold_37_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15605..16468)
DNA (864bp) protein (288aa)
HAD family hydrolase (EC:5.4.2.8)
HAD family hydrolase {ECO:0000313|EMBL:ADB09543.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ADB09543.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
HAD family hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2Q9Q7_BIFDB
L1_008_092G1_scaffold_37_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16609..16929
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S5H4_9BIFI
hypothetical protein
Possibl zinc metallo-peptidase domain protein {ECO:0000313|EMBL:ETO97815.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_092G1_scaffold_37_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16934..18469)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q791_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09541.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_37_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18466..18930)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q792_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09540.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_37_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18930..21515)
DNA (2586bp) protein (862aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S5H6_9BIFI
Putative membrane protein {ECO:0000313|EMBL:ETO97744.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_092G1_scaffold_37_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21548..21847)
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB n=4 Tax=Bifidobacterium dentium RepID=D2Q9Q3_BIFDB
whiB; WhiB-type transcription regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_092G1_scaffold_37_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22122..23513
DNA (1392bp) protein (464aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N8N9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO97766.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lytR; cell envelope-related transcriptional attenuator
L1_008_092G1_scaffold_37_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23583..24965
DNA (1383bp) protein (461aa)
Cell envelope-related transcriptional attenuator n=2 Tax=Bifidobacterium dentium RepID=D2Q9Q1_BIFDB
cell envelope-related transcriptional attenuator
Uncharacterized protein {ECO:0000313|EMBL:ETO97842.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_092G1_scaffold_37_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25059..26879
DNA (1821bp) protein (607aa)
FtsK/SpoIIIE family protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q797_9BIFI
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFM41612.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DNA segregation ATPase-like protein
L1_008_092G1_scaffold_37_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26964..27242
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB n=6 Tax=Bifidobacterium RepID=A1A153_BIFAA
hypothetical protein
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_37_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27346..28842)
DNA (1497bp) protein (499aa)
histidine kinase-like protein (EC:2.7.13.3)
Histidine kinase-like protein n=4 Tax=Bifidobacterium dentium RepID=D2Q9P8_BIFDB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFM41614.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_37_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28964..29860
DNA (897bp) protein (299aa)
Hemolysin-III related protein n=2 Tax=Bifidobacterium dentium RepID=D2Q9P7_BIFDB
hlyIII; hemolysin-III related protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26833.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_092G1_scaffold_37_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29978..30457)
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=4 Tax=Bifidobacterium dentium RepID=D2Q9P6_BIFDB
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_092G1_scaffold_37_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30498..30905)
DNA (408bp) protein (136aa)
fkbP; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Bifidobacterium dentium RepID=D2Q9P5_BIFDB
L1_008_092G1_scaffold_37_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30957..32420)
DNA (1464bp) protein (488aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EFM41618.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFM41618.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sdaA; L-serine dehydratase (EC:4.3.1.17)
L-serine ammonia-lyase n=2 Tax=Bifidobacterium dentium RepID=E0Q7A3_9BIFI
L1_008_092G1_scaffold_37_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32459..33028)
DNA (570bp) protein (190aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5J0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09529.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying items 1-30 of 151 in total

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