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L1_008_092G1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_52_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(658..1368)
DNA (711bp) protein (237aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Acyltransferase n=2 Tax=Clostridium symbiosum RepID=U2DB09_CLOSY
phospholipid/glycerol acyltransferase
L1_008_092G1_scaffold_52_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1387..2127)
DNA (741bp) protein (247aa)
Cell division protein FtsX n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TNQ6_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cell division protein FtsX
L1_008_092G1_scaffold_52_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2172..2492)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X4C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90733.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L1_008_092G1_scaffold_52_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2504..3760)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VJY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90734.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
FOG: Glucan-binding domain (YG repeat)
L1_008_092G1_scaffold_52_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3800..4924)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57580.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
NLP/P60 protein
L1_008_092G1_scaffold_52_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4940..5491)
DNA (552bp) protein (184aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=4 Tax=Clostridium RepID=U2DGD9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03446.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_52_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5569..6411)
DNA (843bp) protein (281aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=2 Tax=Clostridium RepID=E9SUA2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03445.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_52_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6576..9128)
DNA (2553bp) protein (851aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=3 Tax=Clostridium symbiosum RepID=E7GSB9_CLOSY
L1_008_092G1_scaffold_52_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9235..11148)
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Clostridium RepID=E9SUA4_CLOSY
L1_008_092G1_scaffold_52_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11165..12247)
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUA5_CLOSY
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA replication and repair protein RecF
L1_008_092G1_scaffold_52_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12260..12469)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SUA6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03441.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_52_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12483..13601)
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=3 Tax=Clostridium RepID=E7GSC3_CLOSY
L1_008_092G1_scaffold_52_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13860..15230)
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=4 Tax=Clostridium RepID=E7GSC4_CLOSY
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
chromosomal replication initiator protein DnaA
L1_008_092G1_scaffold_52_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15779..16345)
DNA (567bp) protein (189aa)
Chromate transporter n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSC5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03438.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
chromate transporter
L1_008_092G1_scaffold_52_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16342..16896)
DNA (555bp) protein (185aa)
Chromate transport protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUB0_CLOSY
Chromate transporter {ECO:0000313|EMBL:EGA92269.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
chromate transporter
L1_008_092G1_scaffold_52_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16924..18528)
DNA (1605bp) protein (535aa)
gamma-glutamyltranspeptidase (EC:2.3.2.2)
Putative gamma-glutamyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUB1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92270.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_52_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18789..19310
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SUB2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92271.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_52_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19316..21406
DNA (2091bp) protein (697aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSC9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92272.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative sigma-54 specific transcriptional regulator
L1_008_092G1_scaffold_52_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21530..21664
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=4 Tax=Clostridium RepID=E7GSD0_CLOSY
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
LSU ribosomal protein L34P
L1_008_092G1_scaffold_52_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21683..22066
DNA (384bp) protein (128aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=3 Tax=Clostridium RepID=G5FJN0_9CLOT
L1_008_092G1_scaffold_52_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22291..23535
DNA (1245bp) protein (415aa)
SpoJ protein n=3 Tax=Clostridium symbiosum RepID=E7GSD3_CLOSY
SpoJ protein {ECO:0000313|EMBL:EGA92276.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L1_008_092G1_scaffold_52_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23548..24216
DNA (669bp) protein (223aa)
R3H domain protein n=5 Tax=Clostridium RepID=E9SUB8_CLOSY
Probable RNA-binding protein {ECO:0000313|PDB:3GKU}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted RNA-binding protein
L1_008_092G1_scaffold_52_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24396..25775
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
tRNA modification GTPase MnmE n=2 Tax=Clostridium symbiosum RepID=E9SUB9_CLOSY
tRNA modification GTPase trmE
L1_008_092G1_scaffold_52_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25905..27827
DNA (1923bp) protein (641aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJM6_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glucose-inhibited division protein A
L1_008_092G1_scaffold_52_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27850..28578
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.-.- 2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Clostridium RepID=E7GSD7_CLOSY
L1_008_092G1_scaffold_52_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29417..30367)
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SUC2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92281.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_52_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30791..31561
DNA (771bp) protein (257aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=4 Tax=Clostridium RepID=E9SUC3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03425.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATPases involved in chromosome partitioning
L1_008_092G1_scaffold_52_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31676..32746
DNA (1071bp) protein (357aa)
Stage 0 sporulation protein J n=3 Tax=Clostridium RepID=E7GSE0_CLOSY
Stage 0 sporulation protein J {ECO:0000313|EMBL:EGA92283.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ParB-like partition proteins
L1_008_092G1_scaffold_52_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32821..33324
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SUC5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI79967.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_092G1_scaffold_52_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33474..34367
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUC6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03422.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
Displaying items 1-30 of 107 in total

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