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L1_008_092G1_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 139 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_59_1
unknown

Not on your lists

comp(904..1692)
DNA (789bp) protein (263aa)

This feature has no annotations

L1_008_092G1_scaffold_59_2
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1836..2429)
DNA (594bp) protein (198aa)
SCP-like protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HJY4_9ACTN
SCP-like protein {ECO:0000313|EMBL:CDB34364.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
kinesin K39
L1_008_092G1_scaffold_59_3
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2684..2905)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:ETY72102.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L1_008_092G1_scaffold_59_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2902..3807)
DNA (906bp) protein (302aa)
DnaB Replicative DNA helicase n=2 Tax=Bifidobacterium dentium RepID=D2QB12_BIFDB
replicative DNA helicase
DnaB Replicative DNA helicase {ECO:0000313|EMBL:ADB09998.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_59_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3904..4668
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8V4_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27319.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
hypothetical protein
L1_008_092G1_scaffold_59_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4696..6234
DNA (1539bp) protein (513aa)
Cell division protein ftsZ n=2 Tax=Bifidobacterium dentium RepID=D2QB14_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27320.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
ftsZ; cell division protein ftsZ
L1_008_092G1_scaffold_59_7
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6432..6857
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RC21_9BIFI
Methylase of polypeptide chain release factors {ECO:0000313|EMBL:ETY72106.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
hypothetical protein
L1_008_092G1_scaffold_59_8
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7363..7566)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P7P1_9BIFI
The helix-turn-helix motif {ECO:0000313|EMBL:ETY71202.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
hypothetical protein
L1_008_092G1_scaffold_59_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7557..7871)
DNA (315bp) protein (105aa)
XRE family transcriptional regulator n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NZT7_9BIFI
XRE family transcriptional regulator {ECO:0000313|EMBL:CDC16695.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
transcriptional regulator
L1_008_092G1_scaffold_59_10
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8304..11372
DNA (3069bp) protein (1023aa)
Putative type I restriction enzyme {ECO:0000313|EMBL:KFI97573.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KFI97573.1};; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
putative type-1 restriction enzyme MjaXP R protein (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPZ4_9FIRM
L1_008_092G1_scaffold_59_11
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11369..12994
DNA (1626bp) protein (542aa)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KFI97574.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KFI97574.1};; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KVC3_9ACTN
L1_008_092G1_scaffold_59_12
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12987..14222
DNA (1236bp) protein (412aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AIR11001.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AIR11001.1};; TaxID=1624 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius.;"
Type I restriction modification DNA specificity domain protein n=2 Tax=Lactobacillus iners RepID=E1NYH4_9LACO
L1_008_092G1_scaffold_59_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14498..16048
DNA (1551bp) protein (517aa)
Phage prohead protease, HK97 family n=1 Tax=Actinomyces graevenitzii F0530 RepID=U1RCL4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:BAP83020.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L1_008_092G1_scaffold_59_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16071..16619)
DNA (549bp) protein (183aa)
DNA invertase-like protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2Y2_BIFAA
invA; DNA invertase-like protein
DNA invertase-like protein {ECO:0000313|EMBL:BAF40065.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_092G1_scaffold_59_15
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16926..18176)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002DC83D4
DNA-binding protein
Tax=GWB2_Geobacteraceae_52_12_curated
L1_008_092G1_scaffold_59_16
unknown

Not on your lists

comp(19674..19910)
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_092G1_scaffold_59_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20013..21266
DNA (1254bp) protein (418aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
nagA1; NagA1 N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.2.3)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9R3_9BIFI
L1_008_092G1_scaffold_59_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21367..22212)
DNA (846bp) protein (282aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM40272.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EFM40272.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
rbsA2; ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QAU4_9BIFI
L1_008_092G1_scaffold_59_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22236..23321)
DNA (1086bp) protein (362aa)
N-acetylglucosamine repressor (EC:5.1.3.9)
ROK family protein n=2 Tax=Bifidobacterium dentium RepID=E0QAU5_9BIFI
ROK family protein {ECO:0000313|EMBL:EFM40273.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_59_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23666..24823
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAU6_9BIFI
Putative multiple sugar-binding periplasmic protein SbpA {ECO:0000313|EMBL:ETO97656.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_092G1_scaffold_59_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24904..26460
DNA (1557bp) protein (519aa)
rbsA1; ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium dentium RepID=B1S9R7_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27944.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_092G1_scaffold_59_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26457..27677
DNA (1221bp) protein (407aa)
Ribose transport system permease protein RbsC n=2 Tax=Bifidobacterium dentium RepID=D2Q6U7_BIFDB
rbsC1; ribose transporter permease RbsC
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:ADB10638.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_59_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27815..28042
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S9R9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10637.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_092G1_scaffold_59_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28060..28815)
DNA (756bp) protein (252aa)
TIGR03943 family protein n=2 Tax=Bifidobacterium dentium RepID=B1S9S0_9BIFI
TIGR03943 family protein {ECO:0000313|EMBL:ETO97633.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_092G1_scaffold_59_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28817..29917)
DNA (1101bp) protein (367aa)
Putative permease n=2 Tax=Bifidobacterium dentium RepID=E0QAV1_9BIFI
Putative permease {ECO:0000313|EMBL:EFM40279.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_092G1_scaffold_59_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30519..30986)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAV3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40281.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_092G1_scaffold_59_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31273..32136)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAV4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40282.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_092G1_scaffold_59_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32266..33981)
DNA (1716bp) protein (572aa)
Sialic acid-specific 9-O-acetylesterase (EC:3.1.1.53)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAV5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40283.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_59_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34164..35969
DNA (1806bp) protein (602aa)
1,4-beta-N-acetylmuramidase (EC:3.2.1.96)
Glycosyl hydrolase family 25 n=2 Tax=Bifidobacterium dentium RepID=E0QAV6_9BIFI
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EFM40284.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_092G1_scaffold_59_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35985..36758)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E1NB55_9BIFI
Internalin protein
Internalin protein {ECO:0000313|EMBL:ADB10630.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying items 1-30 of 139 in total

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