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L1_008_092G1_scaffold_145

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_145_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104..1666
DNA (1563bp) protein (521aa)
ABC transporter, substrate-binding protein, family 5 n=3 Tax=Clostridium RepID=E9SSX9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92549.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
dipeptide-binding protein
L1_008_092G1_scaffold_145_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1778..2707
DNA (930bp) protein (310aa)
Peptide ABC transporter permease n=5 Tax=Clostridium RepID=E7GRK1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03792.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_145_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2719..3600
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=4 Tax=Clostridium RepID=E9SSX6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03793.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_092G1_scaffold_145_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3634..4689
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRK3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92552.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
peptide ABC transporter ATP-binding protein
L1_008_092G1_scaffold_145_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4689..5636
DNA (948bp) protein (316aa)
Oligopeptide ABC transporter, ATP-binding protein AppF n=3 Tax=Clostridium RepID=U2D9U1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92553.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_008_092G1_scaffold_145_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5716..7143
DNA (1428bp) protein (476aa)
Dipeptidase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRK5_CLOSY
Dipeptidase {ECO:0000313|EMBL:EGA92554.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
dipeptidase
L1_008_092G1_scaffold_145_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7444..8517
DNA (1074bp) protein (358aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSX2_CLOSY
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI78194.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted hydrolase (metallo-beta-lactamase superfamily)
L1_008_092G1_scaffold_145_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8623..9696
DNA (1074bp) protein (358aa)
Periplasmic binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSX1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03798.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_008_092G1_scaffold_145_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9750..10739
DNA (990bp) protein (330aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03799.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_008_092G1_scaffold_145_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10773..11615
DNA (843bp) protein (281aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSW9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03800.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_145_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11692..13623
DNA (1932bp) protein (644aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03801.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_145_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13616..15148
DNA (1533bp) protein (511aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BJB2_CLOSY
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:ERI78189.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_092G1_scaffold_145_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15167..15760
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SSW6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92561.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Guanylate kinase
L1_008_092G1_scaffold_145_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16275..17264
DNA (990bp) protein (330aa)
DNA polymerase III, delta' subunit (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=3 Tax=Clostridium RepID=U2BHM0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03805.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_145_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17268..18179
DNA (912bp) protein (304aa)
PSP1 C-terminal domain protein n=4 Tax=Clostridium RepID=E9SSW4_CLOSY
PSP1 protein {ECO:0000313|EMBL:ERI77613.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Uncharacterized homolog of PSP1
L1_008_092G1_scaffold_145_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18169..18906
DNA (738bp) protein (246aa)
Methyltransferase type 11 n=3 Tax=Clostridium RepID=E7GRL5_CLOSY
Methyltransferase type 11 {ECO:0000313|EMBL:EGA92564.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
type 11 methyltransferase
L1_008_092G1_scaffold_145_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19143..19991
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Ribosomal RNA small subunit methyltransferase I n=3 Tax=Clostridium symbiosum RepID=E7GRL6_CLOSY
conserved hypothetical protein TIGR00096
L1_008_092G1_scaffold_145_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20007..20627
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SSW1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92566.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_145_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20753..22705)
DNA (1953bp) protein (651aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSW0_CLOSY
L1_008_092G1_scaffold_145_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22710..24056)
DNA (1347bp) protein (449aa)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSV9_CLOSY
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:ERI77608.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Glycosidases
L1_008_092G1_scaffold_145_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24095..24331)
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SSV8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92569.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_145_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24476..24916)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03813.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ArsR family transcriptional regulator
L1_008_092G1_scaffold_145_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25318..25860
DNA (543bp) protein (181aa)
Peptidase, A24 family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSV6_CLOSY
Peptidase, A24 family {ECO:0000313|EMBL:ERI77603.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
peptidase A24A prepilin type IV
L1_008_092G1_scaffold_145_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25857..26864
DNA (1008bp) protein (336aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SSV5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03815.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_145_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26945..28099
DNA (1155bp) protein (385aa)
Type II/IV secretion system protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSV4_CLOSY
Type II/IV secretion system protein {ECO:0000313|EMBL:ERI77601.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
type II secretion system protein E
L1_008_092G1_scaffold_145_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28089..28862
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSV3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77600.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
type II secretion system F domain-containing protein
L1_008_092G1_scaffold_145_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28956..30170
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSV2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03818.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_145_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30192..30320
DNA (129bp) protein (43aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SSV1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03819.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_145_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30372..30659
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80402.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_092G1_scaffold_145_30
unknown

Not on your lists

30797..30955
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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