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L1_008_092G1_scaffold_146

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_146_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

636..1322
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=3 Tax=Clostridium RepID=E9SQK2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03561.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_092G1_scaffold_146_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1490..2209
DNA (720bp) protein (240aa)
SCP-like protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQK3_CLOSY
SCP-like protein {ECO:0000313|EMBL:ERI80692.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
SCP-like extracellular
L1_008_092G1_scaffold_146_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2360..3694)
DNA (1335bp) protein (445aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQK4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93992.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_146_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3794..5752)
DNA (1959bp) protein (653aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQK5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93991.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
diguanylate cyclase (GGDEF) domain
L1_008_092G1_scaffold_146_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5742..6377)
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=3 Tax=Clostridium RepID=E9SQK6_CLOSY
L1_008_092G1_scaffold_146_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6450..7496)
DNA (1047bp) protein (349aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQK7_CLOSY
ribosomal RNA small subunit methyltransferase H
L1_008_092G1_scaffold_146_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7500..9005)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SQK8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93988.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
RNA methylase
L1_008_092G1_scaffold_146_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9002..10456)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJ31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGA93987.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DEAD/DEAH box helicase
L1_008_092G1_scaffold_146_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10785..11810)
DNA (1026bp) protein (342aa)
Choloylglycine hydrolase n=3 Tax=Clostridium RepID=E7GMP4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03569.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
L1_008_092G1_scaffold_146_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11967..13355)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQL2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03570.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_146_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13342..13683)
DNA (342bp) protein (114aa)
PadR family Transcriptional regulator n=3 Tax=Clostridium RepID=E7GMP2_CLOSY
PadR family Transcriptional regulator {ECO:0000313|EMBL:EGA93984.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, PadR family
L1_008_092G1_scaffold_146_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14746..15918
DNA (1173bp) protein (391aa)
Transporter, CPA2 family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQL4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03572.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cdu2; Na(+)/H(+) antiporter
L1_008_092G1_scaffold_146_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16006..16254)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SQL5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80739.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_092G1_scaffold_146_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16532..16813)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQL6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80738.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Uncharacterized protein conserved in bacteria (DUF2325).
L1_008_092G1_scaffold_146_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17007..18701)
DNA (1695bp) protein (565aa)
putative alkyl hydroperoxide reductase F subunit (EC:1.8.1.9)
Alkyl hydroperoxide reductase F subunit n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJ38_9CLOT
Alkyl hydroperoxide reductase F subunit {ECO:0000313|EMBL:EHF03575.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_146_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18741..19304)
DNA (564bp) protein (188aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=3 Tax=Clostridium RepID=E9SQL9_CLOSY
Peroxiredoxin {ECO:0000313|EMBL:EHF03576.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_146_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19508..21250)
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQM0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03577.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC transporter
L1_008_092G1_scaffold_146_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21247..23079)
DNA (1833bp) protein (611aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQM1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03578.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC transporter
L1_008_092G1_scaffold_146_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23187..23510)
DNA (324bp) protein (108aa)
GNAT family Acetyltransferase n=2 Tax=Clostridium symbiosum RepID=E7GMN1_CLOSY
GNAT family Acetyltransferase {ECO:0000313|EMBL:EGA93973.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative acetyltransferase
L1_008_092G1_scaffold_146_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23565..24185)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium RepID=E9SQM3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03580.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
TetR family transcriptional regulator
L1_008_092G1_scaffold_146_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24285..25217)
DNA (933bp) protein (311aa)
LysR substrate binding domain protein n=4 Tax=Clostridium RepID=E9SQM4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93971.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_146_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25492..25668
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SQM5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03582.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_146_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25807..26505)
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SQM6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93969.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_146_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26508..28022)
DNA (1515bp) protein (505aa)
Membrane protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMM6_CLOSY
Membrane protein {ECO:0000313|EMBL:EGA93968.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_146_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28588..29580)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMM5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93967.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_146_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29713..30228)
DNA (516bp) protein (172aa)
SNARE-like domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C891_CLOSY
SNARE-like domain protein {ECO:0000313|EMBL:ERI80725.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
DedA family protein
L1_008_092G1_scaffold_146_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30525..31769)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJ53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03553.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
collagen triple helix repeat domain protein
L1_008_092G1_scaffold_146_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31851..32402)
DNA (552bp) protein (184aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SQN2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93964.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_146_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32428..33738)
DNA (1311bp) protein (437aa)
MATE efflux family protein n=2 Tax=Clostridium RepID=E9SQN3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03555.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative efflux protein, MATE family
L1_008_092G1_scaffold_146_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34375..34527)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2BRK1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03556.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Displaying items 1-30 of 59 in total

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