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L1_008_092G1_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_245_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(208..1770)
DNA (1563bp) protein (521aa)
NlpC/P60 family protein n=4 Tax=Clostridium RepID=E7GK75_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03175.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
NLP/P60 protein
L1_008_092G1_scaffold_245_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2157..2954)
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridium RepID=E9SLJ0_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI78376.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter
L1_008_092G1_scaffold_245_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2948..3871)
DNA (924bp) protein (308aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLJ1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94773.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
inner-membrane translocator
L1_008_092G1_scaffold_245_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4116..5144)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GK78_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94774.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type uncharacterized transport system, periplasmic component
L1_008_092G1_scaffold_245_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5402..6802)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLJ3_CLOSY
L1_008_092G1_scaffold_245_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6927..7649)
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=4 Tax=Clostridium RepID=E9SLJ4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94776.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_092G1_scaffold_245_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7646..9304)
DNA (1659bp) protein (553aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLJ5_CLOSY
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:ERI78371.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Na/Pi-cotransporter
L1_008_092G1_scaffold_245_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9465..10448)
DNA (984bp) protein (328aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLJ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03182.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_245_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10624..11760)
DNA (1137bp) protein (379aa)
Efflux ABC transporter, permease protein n=2 Tax=Clostridium symbiosum RepID=U2BJS4_CLOSY
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI78369.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC-type antimicrobial peptide transport system, permease component
L1_008_092G1_scaffold_245_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11792..12505)
DNA (714bp) protein (238aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLJ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03184.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_245_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12521..14278)
DNA (1758bp) protein (586aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DA71_CLOSY
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERI78367.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
RND family efflux transporter, MFP subunit
L1_008_092G1_scaffold_245_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14296..15087)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SLK0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03186.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
S-layer homology domain.
L1_008_092G1_scaffold_245_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15111..15338)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLK1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78366.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
S-layer homology domain.
L1_008_092G1_scaffold_245_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15405..15566)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FKB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03187.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_245_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15600..16463)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FKB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03188.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L1_008_092G1_scaffold_245_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16513..17916)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLK3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78364.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_092G1_scaffold_245_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17913..18125)
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SLK4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94781.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
yozG; HTH-type transcriptional regulator YozG
L1_008_092G1_scaffold_245_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18141..18593)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SLK5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03191.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_245_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18836..20386)
DNA (1551bp) protein (517aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=4 Tax=Clostridium RepID=E9SLK6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94783.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_245_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20529..21005)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FKC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03193.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative peptidase
L1_008_092G1_scaffold_245_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21038..25990)
DNA (4953bp) protein (1651aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FG75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04594.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_245_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26010..27347)
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FG74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04593.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_245_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27650..28927)
DNA (1278bp) protein (426aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=4 Tax=Clostridium RepID=U2C1G1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04592.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_245_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29124..30230
DNA (1107bp) protein (369aa)
4Fe-4S binding domain protein n=4 Tax=Clostridium RepID=E9SLL1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04591.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Uncharacterized Fe-S center protein
L1_008_092G1_scaffold_245_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30453..34988)
DNA (4536bp) protein (1512aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA polymerase III polC-type n=3 Tax=Clostridium RepID=E7GK91_CLOSY
DNA polymerase III subunit alpha
L1_008_092G1_scaffold_245_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35026..36093)
DNA (1068bp) protein (356aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Clostridium RepID=G5FG70_9CLOT
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L1_008_092G1_scaffold_245_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36129..37310)
DNA (1182bp) protein (394aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
RIP metalloprotease RseP n=4 Tax=Clostridium RepID=G5FG69_9CLOT
putative membrane-associated Zn-dependent protease
L1_008_092G1_scaffold_245_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37312..38454)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=4 Tax=Clostridium RepID=E7GK94_CLOSY
L1_008_092G1_scaffold_245_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38592..39392)
DNA (801bp) protein (267aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=3 Tax=Clostridium symbiosum RepID=E7GK95_CLOSY
L1_008_092G1_scaffold_245_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39505..40245)
DNA (741bp) protein (247aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=4 Tax=Clostridium RepID=U2C2Q6_CLOSY
Displaying items 1-30 of 32 in total

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