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L1_008_092G1_scaffold_377

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_377_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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172..780
DNA (609bp) protein (203aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SQV6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94141.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Domain of unknown function (DUF1836).
L1_008_092G1_scaffold_377_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1290..2249
DNA (960bp) protein (320aa)
Bile acid transporter n=3 Tax=Clostridium RepID=E9SQV7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03216.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted Na+-dependent transporter
L1_008_092G1_scaffold_377_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2458..2769)
DNA (312bp) protein (104aa)
TrpR family protein YerC/YecD n=4 Tax=Clostridium RepID=U2D5D4_CLOSY
TrpR protein YerC/YecD {ECO:0000313|EMBL:EHF03217.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
TrpR-related protein YerC/YecD
L1_008_092G1_scaffold_377_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2886..3698)
DNA (813bp) protein (271aa)
Cof-like hydrolase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQV9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94138.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_092G1_scaffold_377_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3901..4899
DNA (999bp) protein (333aa)
NMT1/THI5-like protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQW0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94137.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sulfonate/nitrate/taurine transport system substrate-binding protein
L1_008_092G1_scaffold_377_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5028..5144)
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GM73_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94136.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_377_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5201..5419)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQW1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06449.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
chemotaxis signal transduction protein
L1_008_092G1_scaffold_377_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5573..5776
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SQW2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94135.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_377_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5970..7232)
DNA (1263bp) protein (421aa)
GroES-like protein n=3 Tax=Clostridium RepID=E9SQW3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06455.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alcohol dehydrogenase
L1_008_092G1_scaffold_377_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7293..7766)
DNA (474bp) protein (158aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQW4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94133.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
L1_008_092G1_scaffold_377_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8082..10181)
DNA (2100bp) protein (700aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
PRD domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C4W4_CLOSY
PRD domain protein {ECO:0000313|EMBL:ERI79570.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_092G1_scaffold_377_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10363..11748)
DNA (1386bp) protein (462aa)
PTS system mannitol-specific transporter subunit IIC (EC:2.7.1.69)
EIICBA-Mtl n=2 Tax=Clostridium symbiosum RepID=E9SQW6_CLOSY
EIICB-Mtl {ECO:0000313|EMBL:ERI79571.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_092G1_scaffold_377_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11989..13218)
DNA (1230bp) protein (410aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Clostridium RepID=E9SQW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06459.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_377_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13506..15002
DNA (1497bp) protein (499aa)
Polysaccharide deacetylase n=2 Tax=Clostridium symbiosum RepID=E9SQW8_CLOSY
Polysaccharide deacetylase {ECO:0000313|EMBL:ERI76858.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_092G1_scaffold_377_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15189..16118
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQW9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06461.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_377_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16252..17187)
DNA (936bp) protein (312aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SQX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76860.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
CobW/HypB/UreG, nucleotide-binding domain.
L1_008_092G1_scaffold_377_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17248..18480)
DNA (1233bp) protein (411aa)
CobW/P47K family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQX1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06463.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cobalamin synthesis protein P47K
L1_008_092G1_scaffold_377_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18633..19457)
DNA (825bp) protein (275aa)
ABC 3 transport family protein n=2 Tax=Clostridium symbiosum RepID=E9SQX2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94125.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L1_008_092G1_scaffold_377_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19454..20164)
DNA (711bp) protein (237aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQX3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06465.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_377_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20165..21229)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06466.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L1_008_092G1_scaffold_377_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21226..21909)
DNA (684bp) protein (228aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase, family IA, variant 3 n=3 Tax=Clostridium symbiosum RepID=U2BXA4_CLOSY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EGA94122.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_377_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22276..22671
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06468.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_377_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22893..24170)
DNA (1278bp) protein (426aa)
Site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=E9SQX7_CLOSY
Site-specific recombinase/integrase {ECO:0000313|EMBL:ENZ53387.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Site-specific recombinase XerD
L1_008_092G1_scaffold_377_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24116..24250)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RQ71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16965.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L1_008_092G1_scaffold_377_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24250..24453)
DNA (204bp) protein (68aa)
Uncharacterized protein n=11 Tax=Clostridiales RepID=A8RQ72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGA91625.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Excisionase from transposon Tn916.
L1_008_092G1_scaffold_377_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24883..25122)
DNA (240bp) protein (80aa)
Uncharacterized protein n=8 Tax=Clostridiales RepID=A8RQ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16967.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Helix-turn-helix domain protein
L1_008_092G1_scaffold_377_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25119..25562)
DNA (444bp) protein (148aa)
DNA-directed RNA polymerase specialized sigma subunit (EC:2.7.7.6)
Uncharacterized protein n=7 Tax=Clostridiales RepID=A8RQ76_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHL67685.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Displaying 27 items

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