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L1_008_092G1_scaffold_427

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_427_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1646)
DNA (1644bp) protein (548aa)
Glycosyl hydrolase family 25 n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SU47_CLOSY
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:ERI79714.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
FOG: Glucan-binding domain (YG repeat)
L1_008_092G1_scaffold_427_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1826..2233)
DNA (408bp) protein (136aa)
MerR family Transcriptional regulator n=3 Tax=Clostridium RepID=E7GLF6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07037.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
transcriptional regulator, MerR family
L1_008_092G1_scaffold_427_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2344..3384)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SU49_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07038.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_427_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3548..4522
DNA (975bp) protein (325aa)
LysR substrate binding domain protein n=4 Tax=Clostridium RepID=E9SU50_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94355.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative LysR family transcriptional regulator
L1_008_092G1_scaffold_427_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4570..5466)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F990_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07040.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
multidrug transporter
L1_008_092G1_scaffold_427_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5456..6322)
DNA (867bp) protein (289aa)
AraC-like ligand binding domain protein n=2 Tax=Clostridium symbiosum RepID=E9SU52_CLOSY
AraC-like ligand binding domain protein {ECO:0000313|EMBL:ERI79708.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_092G1_scaffold_427_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6548..7243)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SU53_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06955.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Integral membrane protein, interacts with FtsH
L1_008_092G1_scaffold_427_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7380..8816)
DNA (1437bp) protein (479aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=E7GLF0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06956.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative efflux protein, MATE family
L1_008_092G1_scaffold_427_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9039..10340)
DNA (1302bp) protein (434aa)
Peptidoglycan binding domain protein n=4 Tax=Clostridium RepID=U2C5C3_CLOSY
Peptidoglycan binding domain protein {ECO:0000313|EMBL:ERI79705.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Putative peptidoglycan-binding domain-containing protein
L1_008_092G1_scaffold_427_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10411..12207)
DNA (1797bp) protein (599aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=3 Tax=Clostridium RepID=E9SU56_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06958.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_092G1_scaffold_427_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12223..13647)
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C6R4_CLOSY
dihydrolipoamide dehydrogenase
L1_008_092G1_scaffold_427_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13669..14679)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SU58_CLOSY
L1_008_092G1_scaffold_427_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15010..16854)
DNA (1845bp) protein (615aa)
ptsG; putative PTS system glucose-specific EIICBA component (EC:2.7.1.69)
PTS system, glucose-like IIB component n=2 Tax=Clostridium symbiosum RepID=E9SU59_CLOSY
Putative PTS system glucoside-specific EIICBA component {ECO:0000313|EMBL:ERI79701.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_092G1_scaffold_427_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16909..17112)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGA94346.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L1_008_092G1_scaffold_427_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17277..19643)
DNA (2367bp) protein (789aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C5C0_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI79700.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L1_008_092G1_scaffold_427_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19704..20273)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GLE3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94344.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Glycopeptide antibiotics resistance protein
L1_008_092G1_scaffold_427_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20682..20930)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C6R0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94343.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
dTDP-glucose pyrophosphorylase
L1_008_092G1_scaffold_427_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20911..21633)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C6R0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI79698.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
dTDP-glucose pyrophosphorylase
L1_008_092G1_scaffold_427_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21708..23156)
DNA (1449bp) protein (483aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DE48_CLOSY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ERI79697.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Polysaccharide biosynthesis protein
Displaying 19 items

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