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L1_008_092G1_scaffold_455

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_455_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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196..342
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=4 Tax=Clostridium RepID=E9SKH8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06089.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_092G1_scaffold_455_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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496..1896
DNA (1401bp) protein (467aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKH9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06088.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
radical SAM protein
L1_008_092G1_scaffold_455_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1951..4107
DNA (2157bp) protein (719aa)
Export membrane protein SecD n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKI0_CLOSY
Translocase subunit secF/protein translocase subunit secD {ECO:0000313|EMBL:EGA93398.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
protein translocase subunit secF/protein translocase subunit secD
L1_008_092G1_scaffold_455_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4111..5253
DNA (1143bp) protein (381aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=3 Tax=Clostridium RepID=E7GP74_CLOSY
L1_008_092G1_scaffold_455_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5343..5615
DNA (273bp) protein (91aa)
Preprotein translocase, YajC subunit n=4 Tax=Clostridium RepID=E9SKI2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93400.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
protein translocase subunit yajC
L1_008_092G1_scaffold_455_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5811..6410
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium symbiosum RepID=U2BL82_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93401.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcription regulator
L1_008_092G1_scaffold_455_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6430..7107
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C4C6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93402.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_455_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7123..7548
DNA (426bp) protein (142aa)
DUF2871 family protein n=4 Tax=Clostridium RepID=E7GP78_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78902.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Hypothetical protein
L1_008_092G1_scaffold_455_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7659..8528)
DNA (870bp) protein (290aa)
Transcriptional regulator n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GP79_CLOSY
Transcriptional regulator {ECO:0000313|EMBL:EGA93404.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted transcriptional regulators
L1_008_092G1_scaffold_455_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8775..8987
DNA (213bp) protein (71aa)
Ferredoxin n=4 Tax=Clostridium RepID=E7GP80_CLOSY
Ferredoxin {ECO:0000313|EMBL:EGA93405.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
4Fe-4S ferredoxin
L1_008_092G1_scaffold_455_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8984..9574
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKI9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93406.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_455_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9868..10953
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=3 Tax=Clostridium RepID=E7GP82_CLOSY
L1_008_092G1_scaffold_455_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11399..13069
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=4 Tax=Clostridium RepID=U2BLK8_CLOSY
L1_008_092G1_scaffold_455_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13158..14846
DNA (1689bp) protein (563aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=4 Tax=Clostridium RepID=E9SKJ2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93409.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_092G1_scaffold_455_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14967..16052
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SKJ3_CLOSY
L1_008_092G1_scaffold_455_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16077..17246
DNA (1170bp) protein (390aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=4 Tax=Clostridium RepID=E9SKJ4_CLOSY
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ERI79021.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L1_008_092G1_scaffold_455_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17375..18652
DNA (1278bp) protein (426aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SKJ5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93412.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_092G1_scaffold_455_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18735..20006)
DNA (1272bp) protein (424aa)
Peptidase M23B n=3 Tax=Clostridium RepID=E7GP88_CLOSY
Peptidase M23B {ECO:0000313|EMBL:EGA93413.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Membrane proteins related to metalloendopeptidases
L1_008_092G1_scaffold_455_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20204..20692
DNA (489bp) protein (163aa)
Phenylacetic acid degradation protein PaaI n=3 Tax=Clostridium symbiosum RepID=E7GP89_CLOSY
Phenylacetic acid degradation protein PaaI {ECO:0000313|EMBL:EGA93414.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
uncharacterized domain 1
L1_008_092G1_scaffold_455_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20829..20915
DNA (87bp) protein (29aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FKJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06053.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Displaying 20 items

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