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L1_008_092G1_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_092G1_scaffold_269_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(619..1110)
DNA (492bp) protein (164aa)
30S ribosomal protein S9 n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ABF8_9ACTO
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S9
L1_008_092G1_scaffold_269_2
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1149..1592)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=2 Tax=Actinomyces RepID=J0SWC6_9ACTO
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
50S ribosomal protein L13
L1_008_092G1_scaffold_269_3
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1796..2704)
DNA (909bp) protein (303aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Actinomyces sp. ICM39 RepID=J3EEJ7_9ACTO
L1_008_092G1_scaffold_269_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2701..3450)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZU78_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73587.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
ROK family protein
L1_008_092G1_scaffold_269_5
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3536..4105)
DNA (570bp) protein (190aa)
50S ribosomal protein L17 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TYM9_9ACTO
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
rplQ; 50S ribosomal protein L17
L1_008_092G1_scaffold_269_6
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4149..5144)
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Actinomyces RepID=E6KU75_9ACTO
DNA-directed RNA polymerase subunit alpha
L1_008_092G1_scaffold_269_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5269..5679)
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=6 Tax=Actinomyces RepID=A7B9L8_9ACTO
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
30S ribosomal protein S11
L1_008_092G1_scaffold_269_8
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5741..6139)
DNA (399bp) protein (133aa)
30S ribosomal protein S13 n=9 Tax=Actinobacteria RepID=A7B9L9_9ACTO
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
30S ribosomal protein S13
L1_008_092G1_scaffold_269_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6264..6377)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=14 Tax=Actinobacteria RepID=A7B9M0_9ACTO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
rpmJ; 50S ribosomal protein L36
L1_008_092G1_scaffold_269_10
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6418..6639)
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=11 Tax=Actinobacteria RepID=A7B9M1_9ACTO
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
translation initiation factor IF-1
L1_008_092G1_scaffold_269_11
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7601..8467)
DNA (867bp) protein (289aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
map2; methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YMM3_9ACTO
L1_008_092G1_scaffold_269_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8513..9091)
DNA (579bp) protein (193aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Adenylate kinase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YMN5_9ACTO
adk; adenylate kinase
L1_008_092G1_scaffold_269_13
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9088..10380)
DNA (1293bp) protein (431aa)
Protein translocase subunit SecY n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9M4_9ACTO
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
secY; preprotein translocase subunit SecY
L1_008_092G1_scaffold_269_14
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10638..11102)
DNA (465bp) protein (155aa)
50S ribosomal protein L15 n=4 Tax=Actinomyces RepID=A7B9M5_9ACTO
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
50S ribosomal protein L15
L1_008_092G1_scaffold_269_15
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(11105..11290)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=4 Tax=Actinobacteria RepID=J3EEN1_9ACTO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
50S ribosomal protein L30
L1_008_092G1_scaffold_269_16
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11290..11979)
DNA (690bp) protein (230aa)
30S ribosomal protein S5 n=3 Tax=Actinomyces RepID=A7B9M7_9ACTO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
30S ribosomal protein S5
L1_008_092G1_scaffold_269_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12008..12379)
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZU94_9ACTO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
50S ribosomal protein L18
L1_008_092G1_scaffold_269_18
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12379..12921)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TYP2_9ACTO
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
50S ribosomal protein L6
L1_008_092G1_scaffold_269_19
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12937..13308)
DNA (372bp) protein (124aa)
30S ribosomal protein S8 n=4 Tax=Actinobacteria RepID=J2Z8N3_9ACTO
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
rpsH; 30S ribosomal protein S8
L1_008_092G1_scaffold_269_20
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13398..13583)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=8 Tax=Actinobacteria RepID=A7B9N1_9ACTO
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
30S ribosomal protein S14
L1_008_092G1_scaffold_269_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13587..14132)
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=4 Tax=Actinobacteria RepID=J0SJL0_9ACTO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
50S ribosomal protein L5
L1_008_092G1_scaffold_269_22
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14135..14566)
DNA (432bp) protein (144aa)
50S ribosomal protein L24 n=2 Tax=Actinomyces odontolyticus RepID=A7B9N3_9ACTO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
50S ribosomal protein L24P
L1_008_092G1_scaffold_269_23
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14570..14938)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=7 Tax=Actinobacteria RepID=A7B9N4_9ACTO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
rplN; 50S ribosomal protein L14
L1_008_092G1_scaffold_269_24
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15027..15293)
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=7 Tax=Actinobacteria RepID=A7B9N5_9ACTO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
30S ribosomal protein S17
L1_008_092G1_scaffold_269_25
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15299..15532)
DNA (234bp) protein (78aa)
50S ribosomal protein L29 n=6 Tax=Actinobacteria RepID=A7B9N6_9ACTO
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
rpmC; 50S ribosomal protein L29
L1_008_092G1_scaffold_269_26
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15532..15951)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZB38_9ACTO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
rplP; 50S ribosomal protein L16
L1_008_092G1_scaffold_269_27
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15957..16766)
DNA (810bp) protein (270aa)
30S ribosomal protein S3 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZUA4_9ACTO
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S3
L1_008_092G1_scaffold_269_28
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(16768..17139)
DNA (372bp) protein (124aa)
50S ribosomal protein L22 n=7 Tax=Actinobacteria RepID=A7B9N9_9ACTO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
50S ribosomal protein L22
L1_008_092G1_scaffold_269_29
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(17169..17450)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=8 Tax=Actinobacteria RepID=A7B9P0_9ACTO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
30S ribosomal protein S19
L1_008_092G1_scaffold_269_30
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17467..18303)
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=2 Tax=Actinomyces odontolyticus RepID=A7B9P1_9ACTO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
50S ribosomal protein L2
Displaying items 1-30 of 43 in total

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