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L1_008_124G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_63_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(113..1312)
DNA (1200bp) protein (400aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BUH2_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1522..2934
DNA (1413bp) protein (471aa)
M23 peptidase domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQQ2_PSEFL
M23 peptidase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56585.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_63_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2938..4029
DNA (1092bp) protein (364aa)
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BNN8_PSEFL
L1_008_124G1_scaffold_63_4
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4095..4445)
DNA (351bp) protein (117aa)
Iron-sulfur cluster insertion protein ErpA n=8 Tax=Pseudomonas RepID=ERPA_PSEFS
putative iron binding protein from the HesB_IscA_SufA family
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH4.;"
L1_008_124G1_scaffold_63_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..5645)
DNA (1035bp) protein (345aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BS49_PSEFL
L1_008_124G1_scaffold_63_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5780..6208
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Pseudomonas fluorescens RepID=I2BL35_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54968.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_63_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6233..7195
DNA (963bp) protein (321aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BNM3_PSEFL
oxidoreductase, 2-nitropropane dioxygenase family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55856.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_63_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7264..8220
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BZR1_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8282..9070
DNA (789bp) protein (263aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Pseudomonas fluorescens RepID=I2BKD5_PSEFL
short chain dehydrogenase/reductase family oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EIK62465.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_124G1_scaffold_63_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9116..9454
DNA (339bp) protein (113aa)
Histidine triad domain protein n=3 Tax=Pseudomonas fluorescens RepID=I2BUT0_PSEFL
histidine triad domain protein
Histidine triad domain protein {ECO:0000313|EMBL:EIK60507.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_124G1_scaffold_63_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9540..10187
DNA (648bp) protein (216aa)
coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010150};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BX93_PSEFL
L1_008_124G1_scaffold_63_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10234..10656)
DNA (423bp) protein (141aa)
OsmC family protein n=2 Tax=Pseudomonas fluorescens RepID=I2BS39_PSEFL
OsmC family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10818..11546
DNA (729bp) protein (243aa)
transcriptional regulator n=1 Tax=Pseudomonas tolaasii RepID=UPI0002E7FB52
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFQ60801.1}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens WH6.;"
vfr; cyclic nucleotide-binding transcriptional regulator Vfr
L1_008_124G1_scaffold_63_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11543..12238)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQI9_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12382..13218)
DNA (837bp) protein (279aa)
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=2 Tax=Pseudomonas RepID=I2BLX8_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13215..14264)
DNA (1050bp) protein (350aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=5 Tax=Pseudomonas RepID=I2BZ10_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14274..14867)
DNA (594bp) protein (198aa)
trpG_2; anthranilate synthase component II (EC:4.1.3.27)
TrpG_2 protein {ECO:0000313|EMBL:AFJ58779.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AFJ58779.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Anthranilate synthase, component II n=3 Tax=Pseudomonas RepID=I2BWZ6_PSEFL
L1_008_124G1_scaffold_63_18
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..17202
DNA (1923bp) protein (641aa)
estA; esterase EstA (EC:3.1.1.1)
Outer membrane autotransporter barrel n=2 Tax=Pseudomonas RepID=S6H5C9_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17325..18806)
DNA (1482bp) protein (494aa)
trpE_2; anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Pseudomonas sp. CF150 RepID=S6J0A1_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18873..19691)
DNA (819bp) protein (273aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Phosphoglycolate phosphatase n=2 Tax=Pseudomonas RepID=I2BK71_PSEFL
L1_008_124G1_scaffold_63_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19688..20362)
DNA (675bp) protein (225aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=4 Tax=Pseudomonas RepID=I2BR15_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20447..21595)
DNA (1149bp) protein (383aa)
alcohol dehydrogenase, iron-containing family (EC:1.1.1.1)
Alcohol dehydrogenase, iron-containing family n=2 Tax=Pseudomonas RepID=I2BXW1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21809..22783
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J309_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_24
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22860..23627)
DNA (768bp) protein (256aa)
DnaJ domain protein n=3 Tax=Pseudomonas RepID=I2BWZ4_PSEFL
DnaJ domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23629..24303)
DNA (675bp) protein (225aa)
Nucleotidyl transferase family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BZ05_PSEFL
nucleotidyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59488.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_63_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24300..25325)
DNA (1026bp) protein (342aa)
Putative aminoglycoside phosphotransferase n=2 Tax=Pseudomonas RepID=I2C023_PSEFL
aminoglycoside phosphotransferase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25456..28296
DNA (2841bp) protein (947aa)
LPS-assembly protein LptD n=1 Tax=Pseudomonas sp. CF150 RepID=S6KMR6_9PSED
organic solvent tolerance protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28271..29611
DNA (1341bp) protein (447aa)
UPI0003D63403 related cluster n=1 Tax=unknown RepID=UPI0003D63403
molecular chaperone SurA
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_63_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29608..30597
DNA (990bp) protein (330aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=2 Tax=Pseudomonas RepID=I4KEH8_PSEFL
L1_008_124G1_scaffold_63_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30594..31406
DNA (813bp) protein (271aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BUQ1_PSEFL
Displaying items 1-30 of 105 in total

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