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L1_008_124G1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_101_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50..1543)
DNA (1494bp) protein (498aa)
GTPase HflX n=2 Tax=Bifidobacterium dentium RepID=E0Q5E3_9BIFI
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hflX; hflX GTP-binding protein hflX
L1_008_124G1_scaffold_101_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1668..2306
DNA (639bp) protein (213aa)
Methyltransferase small domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5E2_9BIFI
Methyltransferase small domain protein {ECO:0000313|EMBL:EFM41866.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
16S RNA methylase
L1_008_124G1_scaffold_101_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2303..6406
DNA (4104bp) protein (1368aa)
hrpA; ATP-dependent helicase hrpA (EC:3.6.1.15)
ATP-dependent helicase HrpA n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5E1_9BIFI
Oligonucleotide/oligosaccharide-binding (OB)-fold protein {ECO:0000313|EMBL:ETO95698.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_124G1_scaffold_101_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6460..7680)
DNA (1221bp) protein (407aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5E0_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM41864.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraJ-like protein
L1_008_124G1_scaffold_101_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7950..8759
DNA (810bp) protein (270aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5D9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95689.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_124G1_scaffold_101_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8879..10216)
DNA (1338bp) protein (446aa)
Glutamate--ammonia ligase n=3 Tax=Bifidobacterium dentium RepID=B1S766_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27479.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
glutamine synthetase
L1_008_124G1_scaffold_101_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10275..14219)
DNA (3945bp) protein (1315aa)
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family) n=2 Tax=Bifidobacterium dentium RepID=D2Q5E4_BIFDB
Type VII secretion protein EccCa / type VII secretion protein EccCb multi-domain protein {ECO:0000313|EMBL:ETO95803.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA segregation ATPase-like protein
L1_008_124G1_scaffold_101_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14209..15198)
DNA (990bp) protein (330aa)
FHA domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5D6_9BIFI
FHA domain protein {ECO:0000313|EMBL:EFM41860.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
transRDD family protein
L1_008_124G1_scaffold_101_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15198..16403)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5D5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41859.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_101_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16390..16806)
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S762_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41858.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_101_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16866..17729)
DNA (864bp) protein (288aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S761_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10163.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_124G1_scaffold_101_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17747..18883)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5D2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41856.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_101_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18922..20346)
DNA (1425bp) protein (475aa)
Putative epstein-Barr nuclear antigen 1 n=2 Tax=Bifidobacterium dentium RepID=E0Q5D1_9BIFI
Putative epstein-Barr nuclear antigen 1 {ECO:0000313|EMBL:EFM41855.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_101_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20398..22071)
DNA (1674bp) protein (558aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:ETO95832.1}; EC=3.4.21.- {ECO:0000313|EMBL:ETO95832.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
serine protease (EC:3.4.21.96)
Serine protease n=2 Tax=Bifidobacterium dentium RepID=D2Q5F1_BIFDB
L1_008_124G1_scaffold_101_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22085..22516)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5C8_9BIFI
PF10824 family protein {ECO:0000313|EMBL:ETO95676.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_124G1_scaffold_101_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22621..22908)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S756_9BIFI
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glnD; [protein-PII] uridylyltransferase
L1_008_124G1_scaffold_101_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22948..23259)
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S755_9BIFI
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_124G1_scaffold_101_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23690..25099
DNA (1410bp) protein (470aa)
Putative type VII secretion integral membrane protein EccD n=2 Tax=Bifidobacterium dentium RepID=E0Q5C5_9BIFI
Putative type VII secretion integral membrane protein EccD {ECO:0000313|EMBL:EFM42300.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
CD9/CD37/CD63 antigen
L1_008_124G1_scaffold_101_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25134..27671
DNA (2538bp) protein (846aa)
Type VII secretion protein EccB {ECO:0000313|EMBL:EFM42299.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFM42299.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
serine protease (EC:3.4.21.48)
Type VII secretion protein EccB n=2 Tax=Bifidobacterium dentium RepID=E0Q5C4_9BIFI
L1_008_124G1_scaffold_101_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27689..28414)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Bifidobacterium dentium RepID=E0Q5C3_9BIFI
L1_008_124G1_scaffold_101_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28500..29147)
DNA (648bp) protein (216aa)
hisH; imidazole glycerol phosphate synthase subunit hisH (EC:6.3.5.3)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Imidazole glycerol phosphate synthase subunit HisH n=4 Tax=Bifidobacterium dentium RepID=D2Q5F8_BIFDB
L1_008_124G1_scaffold_101_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29189..29881)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5C1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42296.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_101_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29881..30480)
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Bifidobacterium dentium RepID=E0Q5C0_9BIFI
L1_008_124G1_scaffold_101_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30507..31682)
DNA (1176bp) protein (392aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q5B9_9BIFI
L1_008_124G1_scaffold_101_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31679..33208)
DNA (1530bp) protein (510aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|RuleBase:RU000580}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|RuleBase:RU000580};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZR8_9BIFI
L1_008_124G1_scaffold_101_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33296..34696
DNA (1401bp) protein (467aa)
Permease MFS superfamily n=2 Tax=Bifidobacterium dentium RepID=D2Q5G3_BIFDB
MFS superfamily permease
Permease MFS superfamily {ECO:0000313|EMBL:ADB10178.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_124G1_scaffold_101_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34703..38269)
DNA (3567bp) protein (1189aa)
dnaE; DnaE DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
DnaE DNA polymerase III alpha subunit n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5G4_BIFDB
L1_008_124G1_scaffold_101_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38540..38779
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5B5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42290.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_101_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38749..39687)
DNA (939bp) protein (313aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Ribosomal large subunit pseudouridine synthase D n=4 Tax=Bifidobacterium dentium RepID=D2Q5G6_BIFDB
ribosomal large subunit pseudouridine synthase D
L1_008_124G1_scaffold_101_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39684..40211)
DNA (528bp) protein (176aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Lipoprotein signal peptidase n=4 Tax=Bifidobacterium dentium RepID=D2Q5G7_BIFDB
Displaying items 1-30 of 81 in total

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