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L1_008_124G1_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_115_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(402..1277)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9Z7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD73094.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
cobalt transporter
L1_008_124G1_scaffold_115_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1274..3400)
DNA (2127bp) protein (709aa)
Membrane protein, PF09991 family n=1 Tax=Actinomyces sp. ICM39 RepID=J2YRL0_9ACTO
Membrane protein, PF09991 family {ECO:0000313|EMBL:EWC97167.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter-like protein
L1_008_124G1_scaffold_115_3
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3499..4431)
DNA (933bp) protein (311aa)
5'-nucleotidase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EH28_9ACTO
5'-nucleotidase {ECO:0000313|EMBL:EWC97173.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
putative 5'-nucleotidase
L1_008_124G1_scaffold_115_4
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4655..5791
DNA (1137bp) protein (379aa)
Oligopeptide ABC transporter, oligopeptide-binding protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5P9_9ACTO
Oligopeptide ABC transporter, oligopeptide-binding protein {ECO:0000313|EMBL:EJN46483.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
ABC transporter periplasmic protein
L1_008_124G1_scaffold_115_5
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5879..6907
DNA (1029bp) protein (343aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5J4_9ACTO
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EJN46476.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
ABC transporter permease
L1_008_124G1_scaffold_115_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6904..7704
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U220_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFF78799.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
phosphonate-transporting ATPase
L1_008_124G1_scaffold_115_7
unknown

Not on your lists

comp(7710..7841)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_124G1_scaffold_115_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7904..8113
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=3 Tax=Actinomyces RepID=A7BAW6_9ACTO
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EWC97178.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
cold shock-like protein
L1_008_124G1_scaffold_115_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8448..8666
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U222_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC97174.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_124G1_scaffold_115_10
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9628..9927
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAW4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80338.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_124G1_scaffold_115_11
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9941..11254
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAW3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80337.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_124G1_scaffold_115_12
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11251..11733
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J2ZE04_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN51026.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
L1_008_124G1_scaffold_115_13
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11857..13242)
DNA (1386bp) protein (462aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Atopobium sp. ICM58 RepID=J3EHS0_9ACTN
L1_008_124G1_scaffold_115_14
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13290..14321)
DNA (1032bp) protein (344aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EH31_9ACTO
delta-aminolevulinic acid dehydratase
L1_008_124G1_scaffold_115_15
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14318..15124)
DNA (807bp) protein (269aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EJN46486.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EJN46486.1};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Uroporphyrinogen-III synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5J8_9ACTO
uroporphyrinogen-III synthase
L1_008_124G1_scaffold_115_16
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15121..16155)
DNA (1035bp) protein (345aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Hydroxymethylbilane synthase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV5_9ACTO
L1_008_124G1_scaffold_115_17
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16152..17618)
DNA (1467bp) protein (489aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Putative protoporphyrinogen oxidase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAV4_9ACTO
Putative protoporphyrinogen oxidase {ECO:0000313|EMBL:EDN80328.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_124G1_scaffold_115_18
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17615..18712)
DNA (1098bp) protein (366aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5F9_9ACTO
L1_008_124G1_scaffold_115_19
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18954..20276
DNA (1323bp) protein (441aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Glutamyl-tRNA reductase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC49_9ACTO
glutamyl-tRNAGlu reductase, N-terminal domain protein
L1_008_124G1_scaffold_115_20
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20318..21796
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J2YXR7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN52933.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
L1_008_124G1_scaffold_115_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21973..22923
DNA (951bp) protein (317aa)
Protein RarD n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A9X8_9ACTO
Protein RarD {ECO:0000313|EMBL:EPD73079.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
RarD protein, DMT superfamily transporter
L1_008_124G1_scaffold_115_22
unknown

Not on your lists

23833..24006
DNA (174bp) protein (58aa)

This feature has no annotations

L1_008_124G1_scaffold_115_23
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24474..25826)
DNA (1353bp) protein (451aa)
Replicative DNA helicase {ECO:0000313|EMBL:EWC97292.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EWC97292.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Replicative DNA helicase n=2 Tax=Actinomyces odontolyticus RepID=A7BAV0_9ACTO
replicative DNA helicase
L1_008_124G1_scaffold_115_24
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26166..27539
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQP9_9ACTO
MATE efflux family protein {ECO:0000313|EMBL:EWC97293.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
MATE efflux family protein
L1_008_124G1_scaffold_115_25
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27805..28095
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=4 Tax=Actinomyces RepID=J3J5B6_9ACTO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S6
L1_008_124G1_scaffold_115_26
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28131..28697
DNA (567bp) protein (189aa)
Single-stranded DNA-binding protein n=3 Tax=Actinomyces RepID=A7BAU7_9ACTO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
single-strand binding protein
L1_008_124G1_scaffold_115_27
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28792..29034
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=4 Tax=Actinomyces RepID=A7BAU6_9ACTO
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
rpsR; 30S ribosomal protein S18
L1_008_124G1_scaffold_115_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


29056..29514
DNA (459bp) protein (153aa)
50S ribosomal protein L9 n=2 Tax=Actinomyces RepID=J3J558_9ACTO
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ribosomal protein L9
L1_008_124G1_scaffold_115_29
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29679..32024)
DNA (2346bp) protein (782aa)
Transglycosylase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZR0_9ACTO
Transglycosylase {ECO:0000313|EMBL:EWC96194.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
penicillin-binding protein
L1_008_124G1_scaffold_115_30
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32165..33631)
DNA (1467bp) protein (489aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC43_9ACTO
6-phosphogluconate dehydrogenase
Displaying items 1-30 of 63 in total

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