ggKbase home page

L1_008_124G1_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_181_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143..388
DNA (246bp) protein (82aa)
Outer membrane efflux protein n=5 Tax=Proteobacteria RepID=B9MG27_ACIET
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACM32618.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
L1_008_124G1_scaffold_181_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423..974
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=B9MG26_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM32617.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
L1_008_124G1_scaffold_181_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

971..2086
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Proteobacteria RepID=B9MG25_ACIET
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACM32616.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
L1_008_124G1_scaffold_181_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2100..5246
DNA (3147bp) protein (1049aa)
Heavy metal efflux pump, CzcA family n=3 Tax=Proteobacteria RepID=B7V4Z1_PSEA8
Uncharacterized protein {ECO:0000313|EMBL:EZP05379.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
CzcA family heavy metal efflux pump
L1_008_124G1_scaffold_181_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5300..5698
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=B9MG23_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP05378.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5804..7231
DNA (1428bp) protein (476aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Dihydrolipoamide dehydrogenase n=3 Tax=Proteobacteria RepID=B9MG22_ACIET
dihydrolipoamide dehydrogenase
L1_008_124G1_scaffold_181_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7341..7697)
DNA (357bp) protein (119aa)
Transcriptional regulator, ArsR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG21_ACIET
ArsR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EZP05376.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7933..10428
DNA (2496bp) protein (832aa)
Heavy metal translocating P-type ATPase n=2 Tax=Proteobacteria RepID=B9MG20_ACIET
heavy metal translocating p-type ATPase
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EZP05375.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10444..10923
DNA (480bp) protein (160aa)
Transcriptional regulator, MerR family n=3 Tax=Proteobacteria RepID=B7V4Y7_PSEA8
transcriptional regulator
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:EZP05374.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10939..11277
DNA (339bp) protein (113aa)
[2Fe-2S] ferredoxin n=3 Tax=Proteobacteria RepID=B7V4Y6_PSEA8
fdx; [2Fe-2S] ferredoxin
Ferredoxin, 2Fe-2S type, ISC system protein {ECO:0000313|EMBL:EZP05373.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11501..11773
DNA (273bp) protein (91aa)
Glutaredoxin n=1 Tax=Pseudomonas aeruginosa (strain LESB58) RepID=B7V4Y5_PSEA8
glutaredoxin
Uncharacterized protein {ECO:0000313|EMBL:EZP05372.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11869..12237
DNA (369bp) protein (123aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=C1MEV5_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETU97158.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
L1_008_124G1_scaffold_181_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12312..12506)
DNA (195bp) protein (65aa)
Heavy metal transport/detoxification protein n=3 Tax=Proteobacteria RepID=B7V4Y3_PSEA8
Heavy-metal-associated domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EZP05370.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12607..12819)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KS59_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EZP05369.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
ArsR family transcriptional regulator
L1_008_124G1_scaffold_181_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12824..13420
DNA (597bp) protein (199aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KS47_PSEAI
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EZP05368.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13741..14634
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=2 Tax=Pseudomonas aeruginosa RepID=B7V4Y0_PSEA8
D-alanyl-D-alanine endopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EZP05367.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14661..14969)
DNA (309bp) protein (103aa)
Transcriptional regulator n=2 Tax=Pseudomonas aeruginosa WC55 RepID=T5KGV2_PSEAI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EPL61348.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
L1_008_124G1_scaffold_181_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15059..15700
DNA (642bp) protein (214aa)
Transcriptional regulator, LysR family n=2 Tax=Pseudomonas aeruginosa RepID=B7V4X9_PSEA8
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EZP05366.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
L1_008_124G1_scaffold_181_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15767..17710)
DNA (1944bp) protein (648aa)
Phage-related integrase n=2 Tax=Pseudomonas aeruginosa RepID=B7V4X8_PSEA8
Uncharacterized protein {ECO:0000313|EMBL:EZP05365.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
phage-related integrase
L1_008_124G1_scaffold_181_20
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18073..18633)
DNA (561bp) protein (187aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EIK69180.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EIK69180.1};; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=5 Tax=Pseudomonas RepID=I2BUL4_PSEFL
L1_008_124G1_scaffold_181_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18666..20489)
DNA (1824bp) protein (608aa)
uvrC; excinuclease ABC subunit C (EC:3.1.25.-)
UvrABC system protein C n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GV45_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_181_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20491..21075)
DNA (585bp) protein (195aa)
GacA n=1 Tax=Pseudomonas tolaasii RepID=B2ZP45_PSETO
BarA-associated response regulator UvrY
Response regulator GacA {ECO:0000313|EMBL:EIK59983.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_124G1_scaffold_181_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21284..21649)
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BNC7_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK60707.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_124G1_scaffold_181_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21789..22031)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K7S9_PSEFS
Strain 2-79 PFLU3_contig000042, whole genome shotgun sequence {ECO:0000313|EMBL:KIR20637.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
hypothetical protein
L1_008_124G1_scaffold_181_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22007..22441)
DNA (435bp) protein (145aa)
Putative acetyltransferase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GRL2_9PSED
GNAT family acetyltransferase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_181_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22454..23203)
DNA (750bp) protein (250aa)
Putative hydrolase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GQA9_9PSED
hydrolase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_181_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24032..25111
DNA (1080bp) protein (360aa)
aroF_1; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HST9_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_181_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25401..25823)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Pseudomonas PF7_PSEFL">RepID=I2BPF7_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56140.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_181_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25958..29572)
DNA (3615bp) protein (1205aa)
sensor histidine kinase/response regulator (EC:2.7.13.3)
Sensor histidine kinase/response regulator n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BMP7_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_181_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29584..30210)
DNA (627bp) protein (209aa)
DNA-binding response regulator, LuxR family n=3 Tax=Pseudomonas RepID=I2BT09_PSEFL
LuxR family DNA-binding response regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ57392.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Displaying items 1-30 of 59 in total

View Taxonomy