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L1_008_124G1_scaffold_378

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_378_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(131..1336)
DNA (1206bp) protein (402aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Phosphoglycerate kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q6E0_9BIFI
L1_008_124G1_scaffold_378_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1467..2417)
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=4 Tax=Bifidobacterium dentium RepID=D2QAD0_BIFDB
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_124G1_scaffold_378_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2567..3505)
DNA (939bp) protein (313aa)
UPF0042 nucleotide-binding protein HMPREF0168_0700 n=2 Tax=Bifidobacterium dentium RepID=E0Q6E2_9BIFI
Nucleotide-binding protein HMPREF0168_0700 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3505..4479)
DNA (975bp) protein (325aa)
Shikimate 5-dehydrogenase (EC:2.7.1.71)
Shikimate dehydrogenase substrate binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6E3_9BIFI
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EFM42217.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_124G1_scaffold_378_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4516..6834)
DNA (2319bp) protein (773aa)
UvrABC system protein C n=2 Tax=Bifidobacterium dentium RepID=D2QAC7_BIFDB
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
uvrC; excinuclease ABC subunit C
L1_008_124G1_scaffold_378_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6831..9824)
DNA (2994bp) protein (998aa)
uvrA; excinuclease ABC subunit A (EC:3.6.3.28)
UvrABC system protein A n=2 Tax=Bifidobacterium dentium RepID=E0Q6E5_9BIFI
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_124G1_scaffold_378_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9890..13396)
DNA (3507bp) protein (1169aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6E6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42220.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13396..14103)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6E7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42221.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14109..15602)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6E8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42222.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15883..16113)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6E9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42223.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16205..16573
DNA (369bp) protein (123aa)
Cupin domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F0_9BIFI
Cupin domain protein {ECO:0000313|EMBL:EFM42224.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
cupin
L1_008_124G1_scaffold_378_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16829..17836)
DNA (1008bp) protein (336aa)
VanZ-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F1_9BIFI
VanZ-like protein {ECO:0000313|EMBL:EFM42225.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
membrane protein
L1_008_124G1_scaffold_378_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18145..18324
DNA (180bp) protein (60aa)
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27068.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_124G1_scaffold_378_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18536..19198
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42227.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19307..20053
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N7U2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42228.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_124G1_scaffold_378_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20260..21885
DNA (1626bp) protein (542aa)
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:EFM42229.1}; EC=1.1.1.38 {ECO:0000313|EMBL:EFM42229.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
malate dehydrogenase (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F5_9BIFI
L1_008_124G1_scaffold_378_17
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21999..22715)
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTU3_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETY71524.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
ABC transporter, ATP-binding protein
L1_008_124G1_scaffold_378_18
unknown

Not on your lists

comp(23112..23213)
DNA (102bp) protein (34aa)

This feature has no annotations

L1_008_124G1_scaffold_378_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23269..23874)
DNA (606bp) protein (202aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFM42233.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFM42233.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
pncA; Pyrazinamidase/Nicotinamidase (EC:3.5.1.19)
Isochorismatase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F9_9BIFI
L1_008_124G1_scaffold_378_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24131..24847
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6G0_9BIFI
AAA domain protein {ECO:0000313|EMBL:ETO95174.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter2C ATP-binding protein
L1_008_124G1_scaffold_378_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24930..26531
DNA (1602bp) protein (534aa)
ABC transporter ATP-binding protein (EC:3.6.3.41)
ATP binding protein of ABC transporter n=4 Tax=Bifidobacterium dentium RepID=D2QAB3_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27061.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_124G1_scaffold_378_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26564..27589)
DNA (1026bp) protein (342aa)
Cation diffusion facilitator family transporter n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6G2_9BIFI
cation transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFM42236.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_124G1_scaffold_378_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27675..28388)
DNA (714bp) protein (238aa)
GDSL-like lipase/acylhydrolase n=4 Tax=Bifidobacterium dentium RepID=D2QAB1_BIFDB
GDSL-like lipase/acylhydrolase
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27059.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_124G1_scaffold_378_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28606..29727
DNA (1122bp) protein (374aa)
methionine synthase vitamin-B12 independent protein (EC:2.1.1.14)
Methionine synthase vitamin-B12 independent protein {ECO:0000313|EMBL:ADB09746.1}; EC=2.1.1.14 {ECO:0000313|EMBL:ADB09746.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Methionine synthase vitamin-B12 independent protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAB0_BIFDB
L1_008_124G1_scaffold_378_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29802..30560)
DNA (759bp) protein (253aa)
Carboxymuconolactone decarboxylase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6G6_9BIFI
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EFM42240.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
4-carboxymuconolactone decarboxylase
L1_008_124G1_scaffold_378_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30630..31676)
DNA (1047bp) protein (349aa)
adh; alcohol dehydrogenase (EC:1.1.1.73)
Alcohol dehydrogenase n=4 Tax=Bifidobacterium dentium RepID=D2QAA8_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27056.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_124G1_scaffold_378_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31722..32147)
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family n=4 Tax=Bifidobacterium dentium RepID=D2QAA7_BIFDB
MerR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EFM42242.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_124G1_scaffold_378_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32433..33383)
DNA (951bp) protein (317aa)
cbh; conjugated bile salt hydrolase (EC:3.5.1.24)
Conjugated bile salt hydrolase {ECO:0000313|EMBL:ADB09742.1}; EC=3.5.1.24 {ECO:0000313|EMBL:ADB09742.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Conjugated bile salt hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2QAA6_BIFDB
L1_008_124G1_scaffold_378_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33997..34095)
DNA (99bp) protein (33aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter n=2 Tax=Bifidobacterium dentium RepID=D2QAA2_BIFDB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO95602.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 29 items

View Taxonomy