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L1_008_124G1_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_379_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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86..952
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95870.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC transporter permease
L1_008_124G1_scaffold_379_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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964..1926
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95869.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
inner-membrane translocator
L1_008_124G1_scaffold_379_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1923..2699
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95868.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
livG2; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
L1_008_124G1_scaffold_379_4
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2699..3433
DNA (735bp) protein (245aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95867.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_008_124G1_scaffold_379_5
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3451..4350
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95866.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
shikimate 5-dehydrogenase
L1_008_124G1_scaffold_379_6
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4353..4703
DNA (351bp) protein (117aa)
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4MYT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEZ85277.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L1_008_124G1_scaffold_379_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4687..5688
DNA (1002bp) protein (334aa)
3-dehydro-L-gulonate 2-dehydrogenase {ECO:0000313|EMBL:EEQ58808.1}; EC=1.1.1.130 {ECO:0000313|EMBL:EEQ58808.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
3-dehydro-L-gulonate 2-dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELT4_9FIRM
2,3-diketo-L-gulonate reductase
L1_008_124G1_scaffold_379_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5803..6819
DNA (1017bp) protein (339aa)
Putative zinc-type alcohol dehydrogenase-like protein YjmD {ECO:0000313|EMBL:KJJ70005.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJJ70005.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L-iditol 2-dehydrogenase (EC:1.1.1.14)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS14_9CLOT
L1_008_124G1_scaffold_379_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7073..7567
DNA (495bp) protein (165aa)
dCMP deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY2_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EEQ62040.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_124G1_scaffold_379_10
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7573..9357
DNA (1785bp) protein (595aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRZ6_9CLOT
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KJJ70003.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L1_008_124G1_scaffold_379_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9370..10047
DNA (678bp) protein (226aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY4_9FIRM
L1_008_124G1_scaffold_379_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10064..10786
DNA (723bp) protein (241aa)
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:EEQ62043.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEQ62043.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
exonuclease, DNA polymerase III, epsilon subunit family (EC:2.7.7.7)
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY5_9FIRM
L1_008_124G1_scaffold_379_13
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10854..10964
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95860.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_008_124G1_scaffold_379_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11216..12787
DNA (1572bp) protein (524aa)
VanW-like protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY6_9FIRM
VanW-like protein {ECO:0000313|EMBL:EEQ62044.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
VanW family protein
L1_008_124G1_scaffold_379_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12784..13386
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ62045.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AIR synthase domain-containing protein
L1_008_124G1_scaffold_379_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13411..13893
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY8_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EEQ62046.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AsnC family transcriptional regulator
L1_008_124G1_scaffold_379_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13890..15062
DNA (1173bp) protein (391aa)
Putative aspartate transaminase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY9_9FIRM
Putative aspartate transaminase {ECO:0000313|EMBL:EEQ62047.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
class I and II aminotransferase
L1_008_124G1_scaffold_379_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15070..15579
DNA (510bp) protein (170aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVZ0_9FIRM
tRNA/rRNA methyltransferase SpoU
L1_008_124G1_scaffold_379_19
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15586..17193)
DNA (1608bp) protein (536aa)
Two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FNU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEQ25458.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
chemotaxis protein CheY
L1_008_124G1_scaffold_379_20
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17208..19043)
DNA (1836bp) protein (612aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
signal transduction protein (EC:2.7.13.3)
Protein containing Signal transduction histidine kinase, internal region domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RUE7_9ZZZZ
L1_008_124G1_scaffold_379_21
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19213..20349
DNA (1137bp) protein (379aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9Z7M0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97908.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
periplasmic binding protein/LacI transcriptional regulator
L1_008_124G1_scaffold_379_22
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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20367..21848
DNA (1482bp) protein (494aa)
ccmA; heme ABC exporter, ATP-binding protein CcmA (EC:3.6.3.41)
Ribose ABC transporter ATP-binding protein n=2 Tax=Clostridium bolteae RepID=N9ZJI3_9CLOT
Ribose ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEQ25455.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
L1_008_124G1_scaffold_379_23
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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21863..22870
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BMA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEQ25456.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
branched-chain amino acid transport system / permease component family protein
L1_008_124G1_scaffold_379_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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22882..23661
DNA (780bp) protein (260aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFV9_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEQ57094.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_124G1_scaffold_379_25
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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23673..24533
DNA (861bp) protein (287aa)
Beta-lactamase domain protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RRM4_SPHGB
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADY14283.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L1_008_124G1_scaffold_379_26
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24535..25542
DNA (1008bp) protein (336aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
mannonate dehydratase (EC:4.2.1.8)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQY3_9CLOT
L1_008_124G1_scaffold_379_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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25535..26794
DNA (1260bp) protein (420aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Cellobiose 2-epimerase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8K8_9FIRM
N-acyl-D-glucosamine 2-epimerase
L1_008_124G1_scaffold_379_28
unknown

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26806..27042
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_124G1_scaffold_379_29
unknown

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27154..27477
DNA (324bp) protein (108aa)

This feature has no annotations

L1_008_124G1_scaffold_379_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27502..28287
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61961.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Demethylmenaquinone methyltransferase
Displaying items 1-30 of 34 in total

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