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L1_008_124G1_scaffold_380

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_380_1
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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302..793
DNA (492bp) protein (164aa)
Acetyltransferase, GNAT family n=3 Tax=Pseudomonas RepID=I2BZ25_PSEFL
GNAT family acetyltransferase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_2
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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1123..1521
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BX11_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1643..2836)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KQX9_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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2969..3784
DNA (816bp) protein (272aa)
Alpha/beta hydrolase fold family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BSY1_PSEFL
alpha/beta hydrolase fold family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_5
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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3774..4910
DNA (1137bp) protein (379aa)
Sensor histidine kinase n=2 Tax=Pseudomonas RepID=I2BSK9_PSEFL
sensor histidine kinase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4907..5710)
DNA (804bp) protein (268aa)
dapF_1; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Diaminopimelate epimerase n=3 Tax=Pseudomonas RepID=I2BTQ7_PSEFL
L1_008_124G1_scaffold_380_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5867..6364
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KH40_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56194.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6407..6817)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BUQ7_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6843..7640)
DNA (798bp) protein (266aa)
Putative short-chain dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J6B5_9PSED
short chain dehydrogenase/reductase family oxidoreductase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7652..8662)
DNA (1011bp) protein (337aa)
pld1; pyridoxal 4-dehydrogenase (EC:1.1.1.107)
Pld1 protein {ECO:0000313|EMBL:AFJ55155.1}; EC=1.1.1.107 {ECO:0000313|EMBL:AFJ55155.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Pyridoxal 4-dehydrogenase n=3 Tax=Pseudomonas RepID=I2BLM2_PSEFL
L1_008_124G1_scaffold_380_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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8775..9671
DNA (897bp) protein (299aa)
Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBC4_9PSED
LysR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9831..11123)
DNA (1293bp) protein (431aa)
FAD dependent oxidoreductase n=2 Tax=Pseudomonas RepID=I2BKN2_PSEFL
FAD dependent oxidoreductase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..12208)
DNA (1089bp) protein (363aa)
Putrescine-binding periplasmic protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IZ17_9PSED
periplasmic putrescine-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ59703.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12234..13592)
DNA (1359bp) protein (453aa)
Glutamine synthetase n=3 Tax=Pseudomonas RepID=I2BXH0_PSEFL
glutamine synthetase
Uncharacterized protein {ECO:0000313|EMBL:AFJ58953.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13730..14626
DNA (897bp) protein (299aa)
Putative AraC family regulatory protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J3K4_9PSED
AraC family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14686..15789)
DNA (1104bp) protein (368aa)
acoC; acetoin dehydrogenase E2 component, dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=2 Tax=Pseudomonas RepID=S6HG97_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15786..16805)
DNA (1020bp) protein (340aa)
acoB; acetoin dehydrogenase E1 component, beta subunit (EC:1.1.1.-)
AcoB protein {ECO:0000313|EMBL:AFJ56559.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFJ56559.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Acetoin dehydrogenase E1 component, beta subunit n=4 Tax=Pseudomonas RepID=I2BQM6_PSEFL
L1_008_124G1_scaffold_380_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16843..17820)
DNA (978bp) protein (326aa)
acoA; acetoin dehydrogenase E1 component subunit alpha (EC:1.1.1.-)
AcoA protein {ECO:0000313|EMBL:AFJ55241.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFJ55241.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Acetoin dehydrogenase E1 component, alpha subunit n=4 Tax=Pseudomonas RepID=I2BLV8_PSEFL
L1_008_124G1_scaffold_380_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18128..19990
DNA (1863bp) protein (621aa)
Acetoin catabolism regulatory protein n=3 Tax=Pseudomonas RepID=I2BUG8_PSEFL
acoR; acetoin catabolism regulatory protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20032..20811)
DNA (780bp) protein (260aa)
Diacetyl reductase ((S)-acetoin forming) {ECO:0000313|EMBL:EIK59761.1}; EC=1.1.1.304 {ECO:0000313|EMBL:EIK59761.1};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
budC; diacetyl reductase ((S)-acetoin forming) (EC:1.1.1.304)
Diacetyl reductase ((S)-acetoin forming) n=3 Tax=Pseudomonas RepID=I4K4X1_PSEFL
L1_008_124G1_scaffold_380_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21003..23165
DNA (2163bp) protein (721aa)
Putative ferric siderophore receptor n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HG89_9PSED
TonB-dependent outermembrane receptor {ECO:0000313|EMBL:EIK63743.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
TonB-dependent outermembrane receptor
L1_008_124G1_scaffold_380_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23155..24285)
DNA (1131bp) protein (377aa)
Drug resistance transporter, Bcr/CflA subfamily n=3 Tax=Pseudomonas RepID=I2BXR0_PSEFL
Bcr/CflA family multidrug resistance transporter
Uncharacterized protein {ECO:0000313|EMBL:AFJ59043.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_23
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24384..25154
DNA (771bp) protein (257aa)
Transcriptional regulator, AraC family n=2 Tax=Pseudomonas RepID=I2BKL5_PSEFL
AraC family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25160..25597)
DNA (438bp) protein (146aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Alkylhydroperoxidase AhpD family core domain protein n=2 Tax=Pseudomonas RepID=I4KDD4_PSEFL
alkylhydroperoxidase
L1_008_124G1_scaffold_380_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25691..27136)
DNA (1446bp) protein (482aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family/cyclic nucleotide-binding domain protein n=2 Tax=Pseudomonas RepID=I2BRX4_PSEFL
transporter, small conductance mechanosensitive ion channel (MscS) family/cyclic nucleotide-binding domain protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57007.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27303..28169)
DNA (867bp) protein (289aa)
Pirin family protein n=2 Tax=Pseudomonas RepID=I2BQJ3_PSEFL
pirin family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56526.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28246..29451)
DNA (1206bp) protein (402aa)
Drug resistance transporter, Bcr/CflA subfamily n=2 Tax=Pseudomonas RepID=I2BU63_PSEFL
Bcr/CflA family multidrug resistance transporter
Uncharacterized protein {ECO:0000313|EMBL:AFJ57796.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_380_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29510..30658
DNA (1149bp) protein (383aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Pseudomonas RepID=I2BP33_PSEFL
RND family efflux transporter MFP subunit
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_380_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30661..33735
DNA (3075bp) protein (1025aa)
Putative efflux protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HCI5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AFJ58475.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease protein
Displaying 29 items

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