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L1_008_124G1_scaffold_383

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_383_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1117
DNA (1116bp) protein (372aa)
type IV secretion protein Rhs n=1 Tax=Pseudomonas fluorescens RepID=UPI0002DFC432
Rhs family protein
Putative RHS repeat-like protein {ECO:0000313|EMBL:ABA73494.1}; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;"
L1_008_124G1_scaffold_383_2
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1074..1487
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI0003714206
Uncharacterized protein {ECO:0000313|EMBL:KDD69931.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD30.;"
hypothetical protein
L1_008_124G1_scaffold_383_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1751..1993
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
Exodeoxyribonuclease 7 small subunit n=4 Tax=Pseudomonas RepID=I2BNV8_PSEFL
exodeoxyribonuclease VII small subunit
L1_008_124G1_scaffold_383_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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1990..2877
DNA (888bp) protein (296aa)
ispA; geranyltranstransferase (EC:2.5.1.10)
Geranyltranstransferase n=3 Tax=Pseudomonas RepID=I2BLQ2_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2988..4886
DNA (1899bp) protein (633aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Pseudomonas RepID=I2BYC6_PSEFL
L1_008_124G1_scaffold_383_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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5023..6897
DNA (1875bp) protein (625aa)
Putative TonB-dependent receptor exported protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KAQ5_9PSED
btuB; TonB-dependent outermembrane B12 receptor
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6988..7773)
DNA (786bp) protein (262aa)
Periplasmic cobalamin-binding protein, putative n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BV71_PSEFL
periplasmic cobalamin-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58154.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7770..8189)
DNA (420bp) protein (140aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BTL6_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57599.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8186..8803)
DNA (618bp) protein (206aa)
ribA; GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
GTP cyclohydrolase-2 n=4 Tax=Pseudomonas RepID=I2BQ36_PSEFL
L1_008_124G1_scaffold_383_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8933..9655)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6H1J4_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58409.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9710..10675)
DNA (966bp) protein (322aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IJL4_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10694..11194)
DNA (501bp) protein (167aa)
N utilization substance protein B homolog n=3 Tax=Pseudomonas RepID=I2BRX7_PSEFL
nusB; transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11191..11667)
DNA (477bp) protein (159aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
6,7-dimethyl-8-ribityllumazine synthase n=7 Tax=Pseudomonas RepID=I4K7K2_PSEFL
L1_008_124G1_scaffold_383_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11756..12847)
DNA (1092bp) protein (364aa)
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=4 Tax=Pseudomonas RepID=I2BPE7_PSEFL
L1_008_124G1_scaffold_383_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12863..13525)
DNA (663bp) protein (221aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
RibE protein {ECO:0000313|EMBL:AFJ58052.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AFJ58052.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Riboflavin synthase, alpha subunit n=3 Tax=Pseudomonas RepID=I2BUW9_PSEFL
L1_008_124G1_scaffold_383_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13575..14702)
DNA (1128bp) protein (376aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=2 Tax=Pseudomonas RepID=S6IJM0_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_17
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14699..15163)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=5 Tax=Pseudomonas RepID=I2BY87_PSEFL
nrdR; transcriptional regulator NrdR
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15303..15758
DNA (456bp) protein (152aa)
Lipoprotein, putative n=4 Tax=Pseudomonas RepID=I2BNL2_PSEFL
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EIK62422.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_124G1_scaffold_383_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15755..16411
DNA (657bp) protein (219aa)
Methyltransferase small domain protein n=2 Tax=Pseudomonas RepID=I2BLH8_PSEFL
methyltransferase small domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55111.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16537..17409
DNA (873bp) protein (291aa)
Thioredoxin n=2 Tax=Pseudomonas RepID=S6H1J9_9PSED
thioredoxin domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17406..17747)
DNA (342bp) protein (114aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BL68_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK61202.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_124G1_scaffold_383_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17877..18476
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BNU9_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18625..19335
DNA (711bp) protein (237aa)
Efflux ABC transporter, ATP-binding protein n=3 Tax=Pseudomonas RepID=I2BPZ7_PSEFL
efflux ABC transporter, ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56330.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19337..20602
DNA (1266bp) protein (422aa)
Efflux ABC transporter, permease protein n=2 Tax=Pseudomonas RepID=I2BR97_PSEFL
efflux ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:AFJ56780.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_25
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20614..21135
DNA (522bp) protein (174aa)
Putative lipoprotein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KKA8_9PSED
lipoprotein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_26
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21283..21981
DNA (699bp) protein (233aa)
Outer membrane protein OprG n=3 Tax=Pseudomonas RepID=I2BT63_PSEFL
oprG; outer membrane protein OprG
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22146..23081)
DNA (936bp) protein (312aa)
dTDP-4-dehydrorhamnose reductase, putative n=2 Tax=Pseudomonas RepID=I2BUT2_PSEFL
dTDP-4-dehydrorhamnose reductase
Uncharacterized protein {ECO:0000313|EMBL:AFJ58015.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_124G1_scaffold_383_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23197..26820
DNA (3624bp) protein (1208aa)
lhr; ATP-dependent helicase (EC:3.6.1.-)
Putative ATP-dependent helicase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IX61_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_124G1_scaffold_383_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26778..27440
DNA (663bp) protein (221aa)
lhr; ATP-dependent helicase (EC:3.6.1.-)
Lhr protein {ECO:0000313|EMBL:AFJ58816.1}; EC=3.6.1.- {ECO:0000313|EMBL:AFJ58816.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
ATP-dependent helicase, putative n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BX33_PSEFL
L1_008_124G1_scaffold_383_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27452..29545)
DNA (2094bp) protein (698aa)
Putative transporter-like membrane protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6GZZ6_9PSED
transporter, small conductance mechanosensitive ion channel (MscS) family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 1-30 of 34 in total

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