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L1_008_124G1_scaffold_415

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_415_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..2059)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06108.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_124G1_scaffold_415_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2076..2792)
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBJ5_9CLOT
4-diphosphocytidyl-2-methyl-D-erythritol synthase
L1_008_124G1_scaffold_415_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2959..3777)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06110.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Flagellin and related hook-associated proteins
L1_008_124G1_scaffold_415_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4002..5495)
DNA (1494bp) protein (498aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06111.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
regulatory protein GntR HTH
L1_008_124G1_scaffold_415_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5644..8208)
DNA (2565bp) protein (855aa)
Sensor histidine kinase/response regulator n=1 Tax=Clostridium sp. D5 RepID=F0Z558_9CLOT
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EGB90717.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_008_124G1_scaffold_415_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8216..8578)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06112.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Hpt domain.
L1_008_124G1_scaffold_415_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8598..10241)
DNA (1644bp) protein (548aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FH55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04316.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
diguanylate cyclase (GGDEF) domain
L1_008_124G1_scaffold_415_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11063..11686)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06113.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_124G1_scaffold_415_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12184..12633
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=R0C9C2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12475.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Transposase DDE domain.
L1_008_124G1_scaffold_415_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12755..13909)
DNA (1155bp) protein (385aa)
Transposase, IS4 family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJA6_9CLOT
Transposase, IS4 family {ECO:0000313|EMBL:EEG28444.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
transposase IS4 family protein
L1_008_124G1_scaffold_415_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14486..15049)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57083.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
6-pyruvoyl-tetrahydropterin synthase
L1_008_124G1_scaffold_415_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15158..15535)
DNA (378bp) protein (126aa)
Transcriptional regulator, Fur family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFV2_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EEQ57084.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_124G1_scaffold_415_13
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15881..16474)
DNA (594bp) protein (198aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Clostridiales RepID=A7B4I6_RUMGN
L1_008_124G1_scaffold_415_14
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16488..17213)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B44984
gntR; putative GntR family transcriptional regulator
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:CCG56242.1}; TaxID=1161918 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli WesB.;"
L1_008_124G1_scaffold_415_15
unknown

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comp(17312..17836)
DNA (525bp) protein (175aa)

This feature has no annotations

L1_008_124G1_scaffold_415_16
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17955..18794)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T5C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGL37223.1}; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
hypothetical protein
L1_008_124G1_scaffold_415_17
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18806..20371)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T5C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGL38046.1}; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
phosphotransferase system component
L1_008_124G1_scaffold_415_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20866..22116)
DNA (1251bp) protein (417aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIM1_9CLOT
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter {ECO:0000313|EMBL:ENY90520.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transporter
L1_008_124G1_scaffold_415_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22181..23152)
DNA (972bp) protein (324aa)
dapA; dihydrodipicolinate synthetase (EC:4.2.1.52)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X477_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90521.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L1_008_124G1_scaffold_415_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23559..24554
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WSL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90522.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transcriptional regulator, LacI family
L1_008_124G1_scaffold_415_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24757..26301)
DNA (1545bp) protein (515aa)
BCCT family transporter n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ1_9FIRM
BCCT family transporter {ECO:0000313|EMBL:EEQ57126.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Choline-glycine betaine transporter
L1_008_124G1_scaffold_415_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26380..26805)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57127.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative aconitase subunit 2
L1_008_124G1_scaffold_415_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26793..28058)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57128.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_124G1_scaffold_415_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28087..29604)
DNA (1518bp) protein (506aa)
Transporter, betaine/carnitine/choline family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ4_9FIRM
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EEQ57129.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
choline-glycine betaine transporter
L1_008_124G1_scaffold_415_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29607..29993)
DNA (387bp) protein (129aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ5_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEQ57130.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
endoribonuclease L-PSP, putative
L1_008_124G1_scaffold_415_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30226..31749)
DNA (1524bp) protein (508aa)
CoA binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFZ7_9FIRM
CoA binding domain protein {ECO:0000313|EMBL:EEQ57132.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
acyl-CoA synthetase (NDP forming)
Displaying 26 items

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