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L1_008_124G1_scaffold_417

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_417_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138..791)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61352.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_124G1_scaffold_417_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1074..1850
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_008_124G1_scaffold_417_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1969..2895
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61350.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_124G1_scaffold_417_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2960..5491)
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61348.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_124G1_scaffold_417_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5691..6431)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_008_124G1_scaffold_417_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6469..7314)
DNA (846bp) protein (282aa)
Putative sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK2_9FIRM
Putative sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:EEQ61346.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptidase U4 sporulation factor SpoIIGA
L1_008_124G1_scaffold_417_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7568..8875)
DNA (1308bp) protein (436aa)
Cell division protein FtsZ n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK0_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cell division protein FtsZ
L1_008_124G1_scaffold_417_8
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9904..10284
DNA (381bp) protein (127aa)
Fimbrial isopeptide formation D2 domain-containing protein n=4 Tax=Clostridium RepID=N9X877_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96662.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L1_008_124G1_scaffold_417_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10570..10746
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9Z5P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97576.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
NAD(P)H-nitrite reductase
L1_008_124G1_scaffold_417_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10792..11523)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61343.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_124G1_scaffold_417_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11548..12816)
DNA (1269bp) protein (423aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ8_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L1_008_124G1_scaffold_417_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12899..14122)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97828.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
cell cycle protein
L1_008_124G1_scaffold_417_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14136..15494)
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ6_9FIRM
L1_008_124G1_scaffold_417_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15578..16546)
DNA (969bp) protein (323aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ5_9FIRM
L1_008_124G1_scaffold_417_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16617..18407)
DNA (1791bp) protein (597aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ4_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEQ61338.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_124G1_scaffold_417_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18490..20853)
DNA (2364bp) protein (788aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ3_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEQ61337.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_124G1_scaffold_417_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20831..21361)
DNA (531bp) protein (177aa)
Putative cell division protein FtsL n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ2_9FIRM
Putative cell division protein FtsL {ECO:0000313|EMBL:EEQ61336.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_124G1_scaffold_417_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21548..22495)
DNA (948bp) protein (316aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ1_9FIRM
L1_008_124G1_scaffold_417_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22495..22920)
DNA (426bp) protein (142aa)
Protein MraZ n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETJ0_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
MraZ protein
L1_008_124G1_scaffold_417_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23197..24096)
DNA (900bp) protein (300aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETI8_9FIRM
L1_008_124G1_scaffold_417_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24264..25601)
DNA (1338bp) protein (446aa)
NADH oxidase {ECO:0000313|EMBL:EEQ61331.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EEQ61331.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
NADH oxidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETI7_9FIRM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L1_008_124G1_scaffold_417_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25774..26871
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKS3_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
GTP-binding protein YchF
L1_008_124G1_scaffold_417_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27189..28622
DNA (1434bp) protein (478aa)
Amino acid carrier protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIK3_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EEQ56297.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
amino acid carrier protein
L1_008_124G1_scaffold_417_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28713..29606)
DNA (894bp) protein (298aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBC8_9CLOT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEG51303.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NAD-dependent epimerase/dehydratase
L1_008_124G1_scaffold_417_25
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29623..30369)
DNA (747bp) protein (249aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBC0_9CLOT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEG51295.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
short-chain dehydrogenase
L1_008_124G1_scaffold_417_26
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30380..31294)
DNA (915bp) protein (305aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBC1_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEG51296.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
inner-membrane translocator
L1_008_124G1_scaffold_417_27
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31284..31712)
DNA (429bp) protein (143aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBC2_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEG51297.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
inner-membrane translocator
Displaying 27 items

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