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L1_008_124G1_scaffold_600

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_600_1
unknown

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3..68
DNA (66bp) protein (22aa)

This feature has no annotations

L1_008_124G1_scaffold_600_2
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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70..927
DNA (858bp) protein (286aa)
DMSO reductase anchor subunit n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M2Q7_ENTBF
DMSO reductase anchor subunit
Anaerobic dimethyl sulfoxide reductase chain C {ECO:0000313|EMBL:CDZ83477.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
L1_008_124G1_scaffold_600_3
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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948..1562
DNA (615bp) protein (205aa)
Tat proofreading chaperone DmsD n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q8R8_9ENTR
Tat proofreading chaperone DmsD {ECO:0000256|HAMAP-Rule:MF_00940}; DMSO reductase maturation protein {ECO:0000256|HAMAP-Rule:MF_00940}; Twin-arginine leader-binding protein DmsD {ECO:0000256|HAMAP-Rule:MF_00940}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
twin-argninine leader-binding protein DmsD
L1_008_124G1_scaffold_600_4
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1818..2528
DNA (711bp) protein (237aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WA70_ENT38
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABP60600.1}; Flags: Precursor;; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L1_008_124G1_scaffold_600_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2555..3457
DNA (903bp) protein (301aa)
Substrate binding domain of ABC-type glycine betaine transport system family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QPS1_9ENTR
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDE38343.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
glycine/betaine ABC transporter substrate-binding protein
L1_008_124G1_scaffold_600_6
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3467..4114
DNA (648bp) protein (216aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SBW8_ENTAL
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN64647.1}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
L1_008_124G1_scaffold_600_7
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4114..5262
DNA (1149bp) protein (383aa)
Glycine betaine/L-proline transport ATP binding subunit n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2ILC0_9ENTR
ATP-binding protein {ECO:0000313|EMBL:KDE38345.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
glycine/betaine ABC transporter ATP-binding protein
L1_008_124G1_scaffold_600_8
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5369..6064)
DNA (696bp) protein (232aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q8R3_9ENTR
L1_008_124G1_scaffold_600_9
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6190..7410)
DNA (1221bp) protein (407aa)
Transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VHL1_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGN84317.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_124G1_scaffold_600_10
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7541..8437)
DNA (897bp) protein (299aa)
LysR family transcripitonal regulator n=1 Tax=Enterobacter cloacae RepID=UPI000303D6E0
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AHJ74052.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L1_008_124G1_scaffold_600_11
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8546..9796
DNA (1251bp) protein (417aa)
Membrane protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VH47_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AGN84319.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_124G1_scaffold_600_12
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10123..11610
DNA (1488bp) protein (496aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq {ECO:0000313|EMBL:ABP60592.1}; EC=3.4.17.19 {ECO:0000313|EMBL:ABP60592.1};; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
Carboxypeptidase Taq n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WA62_ENT38
L1_008_124G1_scaffold_600_13
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11679..12149
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VLR1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN84518.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L1_008_124G1_scaffold_600_14
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12451..12852
DNA (402bp) protein (134aa)
Acid shock protein n=2 Tax=Cronobacter sakazakii RepID=K8CKR5_CROSK
Uncharacterized protein {ECO:0000313|EMBL:AKE97155.1}; TaxID=28141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii (Enterobacter sakazakii).;"
hypothetical protein
L1_008_124G1_scaffold_600_15
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13129..13950
DNA (822bp) protein (274aa)
Trypsin family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IK32_9ENTR
Serine protease {ECO:0000313|EMBL:KDE38352.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
serine protease
L1_008_124G1_scaffold_600_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13953..16115)
DNA (2163bp) protein (721aa)
Diguanylate cyclase domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QPR1_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS42302.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
diguanylate cyclase
L1_008_124G1_scaffold_600_17
Raoultella planticola, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16226..16555)
DNA (330bp) protein (110aa)
Spermidine export protein MdtI n=2 Tax=Enterobacteriaceae RepID=M9VVJ7_RAOOR
multidrug efflux system protein MdtI
Spermidine export protein MdtI {ECO:0000256|HAMAP-Rule:MF_01597, ECO:0000256|SAAS:SAAS00166084}; TaxID=1005996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella planticola ATCC 33531.;"
L1_008_124G1_scaffold_600_18
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16542..16904)
DNA (363bp) protein (121aa)
Spermidine export protein MdtJ n=2 Tax=Enterobacteriaceae RepID=M9VYE2_RAOOR
multidrug efflux system protein MdtJ
Spermidine export protein MdtJ {ECO:0000256|HAMAP-Rule:MF_01598, ECO:0000256|SAAS:SAAS00166061}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
L1_008_124G1_scaffold_600_19
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17307..18374)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QPQ6_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44674.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
membrane protein
L1_008_124G1_scaffold_600_20
unknown

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comp(18402..18545)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_008_124G1_scaffold_600_21
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18758..19150
DNA (393bp) protein (131aa)
Protein umuD n=1 Tax=Enterobacter cloacae S611 RepID=V5AMA7_ENTCL
Protein umuD {ECO:0000313|EMBL:ESS56364.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
DNA polymerase V subunit UmuD
L1_008_124G1_scaffold_600_22
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19159..19920)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YU28_9PROT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKM98372.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
L1_008_124G1_scaffold_600_23
unknown

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comp(20067..20234)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_008_124G1_scaffold_600_24
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20191..21252)
DNA (1062bp) protein (354aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Sugar ABC transporter ATP-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2G499_9BURK
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESH88078.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
L1_008_124G1_scaffold_600_25
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21255..22121)
DNA (867bp) protein (289aa)
ABC transporter permease n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GB13_9BURK
ABC transporter permease {ECO:0000313|EMBL:ESH88077.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
binding-protein-dependent transport system inner membrane protein
Displaying 25 items

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