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L1_008_124G1_scaffold_729

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_124G1_scaffold_729_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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146..307
DNA (162bp) protein (54aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6YZ79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79977.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_124G1_scaffold_729_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

297..1253
DNA (957bp) protein (319aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6YZ78_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV69368.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_124G1_scaffold_729_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1250..1591
DNA (342bp) protein (114aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8VJC1_9BACE
radical SAM protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02485.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_124G1_scaffold_729_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1572..2294
DNA (723bp) protein (241aa)
Radical SAM domain protein n=2 Tax=Bacteroides RepID=C6YZ77_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79975.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_124G1_scaffold_729_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2315..2563
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L025_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39039.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_008_124G1_scaffold_729_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2756..3937
DNA (1182bp) protein (394aa)
MFS transporter, DHA1 family, arabinose polymer transporter n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEN9_BACVU
MFS transporter, DHA1 family, arabinose polymer transporter {ECO:0000313|EMBL:EOS02487.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
MFS transporter
L1_008_124G1_scaffold_729_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3898..4317)
DNA (420bp) protein (140aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L027_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79972.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_124G1_scaffold_729_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4456..4923
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEZ8_BACVU
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
ribosome maturation factor RimP
L1_008_124G1_scaffold_729_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4926..6182
DNA (1257bp) protein (419aa)
Transcription termination factor NusA n=14 Tax=Bacteroides RepID=C3Q3S1_9BACE
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_008_124G1_scaffold_729_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6224..9235
DNA (3012bp) protein (1004aa)
Translation initiation factor IF-2 n=5 Tax=Bacteroides RepID=C6YZ71_9BACE
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
infB; translation initiation factor IF-2
L1_008_124G1_scaffold_729_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9374..9877
DNA (504bp) protein (168aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L031_BACV8
hypothetical protein
Membrane protein required for colicin V production {ECO:0000313|EMBL:EOS02492.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_124G1_scaffold_729_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9885..11336
DNA (1452bp) protein (484aa)
ABC transporter permease n=15 Tax=Bacteroides RepID=A6L032_BACV8
cysteine desulfurase activator complex subunit SufB
Cysteine desulfurase {ECO:0000313|EMBL:AII61909.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L1_008_124G1_scaffold_729_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11364..12116
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=7 Tax=Bacteroides RepID=A6L033_BACV8
ABC transporter ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIY79966.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_008_124G1_scaffold_729_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12146..13489
DNA (1344bp) protein (448aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L034_BACV8
ABC transporter permease
FeS assembly protein SufD {ECO:0000313|EMBL:KDS33150.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_008_124G1_scaffold_729_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13496..14710
DNA (1215bp) protein (405aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Aminotransferase n=7 Tax=Bacteroides RepID=A6L035_BACV8
aminotransferase
L1_008_124G1_scaffold_729_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15624..17153)
DNA (1530bp) protein (510aa)
Alpha,alpha-trehalase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3F7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02498.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase
L1_008_124G1_scaffold_729_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17176..17343)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEL1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02498.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase
L1_008_124G1_scaffold_729_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17361..20537)
DNA (3177bp) protein (1059aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Beta-galactosidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HF07_BACVU
glycoside hydrolase
L1_008_124G1_scaffold_729_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20551..21153)
DNA (603bp) protein (201aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q3T2_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56844.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_008_124G1_scaffold_729_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21150..21431)
DNA (282bp) protein (94aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A6L042_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_008_124G1_scaffold_729_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21546..23063)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8WEH1_9BACE
starch-binding protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDF19080.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_008_124G1_scaffold_729_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23084..26212)
DNA (3129bp) protein (1043aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEL6_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS02503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_124G1_scaffold_729_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26436..28061)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HF11_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02504.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_124G1_scaffold_729_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28163..28768
DNA (606bp) protein (202aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Ribonuclease HII n=8 Tax=root RepID=RNH2_BACV8
L1_008_124G1_scaffold_729_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28911..30224)
DNA (1314bp) protein (438aa)
L-fucose:H+ symporter permease n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFD7_BACVU
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EOS02506.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L-fucose permease
L1_008_124G1_scaffold_729_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30337..32112)
DNA (1776bp) protein (592aa)
fucI; sugar isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L-fucose isomerase n=13 Tax=Bacteroides RepID=FUCI_BACV8
L1_008_124G1_scaffold_729_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32134..33114)
DNA (981bp) protein (327aa)
Transcriptional regulator, FucR n=4 Tax=Bacteroides RepID=A6L049_BACV8
transcriptional regulator, FucR
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EET13919.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_008_124G1_scaffold_729_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33561..35075
DNA (1515bp) protein (505aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=6 Tax=Bacteroides RepID=GPMI_BACV8
L1_008_124G1_scaffold_729_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35178..35573
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P405_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33167.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
Displaying 29 items

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