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L1_008_241G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_13_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(71..304)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66889.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cation diffusion facilitator family transporter
L1_008_241G1_scaffold_13_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(244..513)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XQM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08617.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L1_008_241G1_scaffold_13_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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537..2117
DNA (1581bp) protein (527aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMA5_9FIRM
L1_008_241G1_scaffold_13_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2403..5036
DNA (2634bp) protein (878aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDA4_9FIRM
Pyruvate {ECO:0000313|EMBL:CCZ66887.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_13_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5141..5767
DNA (627bp) protein (209aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6X9_9FIRM
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
L1_008_241G1_scaffold_13_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5877..6296
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66885.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_13_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6328..8514
DNA (2187bp) protein (729aa)
Export membrane protein SecD n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUC0_9FIRM
Export membrane protein SecD {ECO:0000313|EMBL:CCZ66884.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SecD/SecF family protein-export membrane protein
L1_008_241G1_scaffold_13_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8511..9815
DNA (1305bp) protein (435aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
Potassium uptake protein TrkH family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM99_9FIRM
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CCZ66883.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_13_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9838..10500
DNA (663bp) protein (221aa)
TrkA N-terminal domain protein n=4 Tax=Clostridiales RepID=A7B763_RUMGN
TrkA N-terminal domain protein {ECO:0000313|EMBL:CCZ66882.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
TrkA-N domain-containing protein
L1_008_241G1_scaffold_13_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10519..11574
DNA (1056bp) protein (352aa)
Phosphate transporter family protein n=4 Tax=Clostridiales RepID=A7B762_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66881.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphate/sulphate permeases
L1_008_241G1_scaffold_13_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11589..12212
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B761_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76323.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Phosphate transport regulator (distant homolog of PhoU)
L1_008_241G1_scaffold_13_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12242..13093
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66879.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted membrane protein
L1_008_241G1_scaffold_13_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13272..14102
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BMD7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49077.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
bltR; multidrug-efflux transporter 2 regulator
L1_008_241G1_scaffold_13_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14185..14964
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UD90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66877.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_13_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15196..15747
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66876.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Protein of unknown function (DUF1393).
L1_008_241G1_scaffold_13_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15759..16361)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66875.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_13_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16358..17512)
DNA (1155bp) protein (385aa)
Monogalactosyldiacylglycerol synthase (EC:2.4.1.46)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66874.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_13_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17519..17965)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66873.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_13_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18272..19903
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UD82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66872.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Na/Pi-cotransporter
L1_008_241G1_scaffold_13_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19969..20172
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNE2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49070.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_241G1_scaffold_13_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20254..20640
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B750_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66871.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_13_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20816..21361
DNA (546bp) protein (182aa)
Stage V sporulation protein T n=4 Tax=Clostridiales RepID=A7B749_RUMGN
Stage V sporulation protein T {ECO:0000313|EMBL:EGN49068.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, AbrB family
L1_008_241G1_scaffold_13_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21445..21588
DNA (144bp) protein (48aa)
RSAM-modified six-cysteine peptide n=4 Tax=Clostridiales RepID=A7B748_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49067.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_13_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21685..23106
DNA (1422bp) protein (474aa)
Six-Cys-in-45 modification radical SAM protein n=3 Tax=Lachnospiraceae RepID=A7B747_RUMGN
SCIFF radical SAM maturase {ECO:0000313|EMBL:ETD16293.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L1_008_241G1_scaffold_13_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23093..25366
DNA (2274bp) protein (758aa)
Export membrane protein SecD n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B746_RUMGN
Export membrane protein SecD {ECO:0000313|EMBL:EDN76308.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
protein translocase subunit secF/protein translocase subunit secD
L1_008_241G1_scaffold_13_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25575..30887
DNA (5313bp) protein (1771aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BP78_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16291.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
cell wall surface anchor family protein
L1_008_241G1_scaffold_13_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31174..32886
DNA (1713bp) protein (571aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDN76305.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDN76305.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B743_RUMGN
L1_008_241G1_scaffold_13_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32946..35252
DNA (2307bp) protein (769aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68508.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_13_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35259..35879
DNA (621bp) protein (207aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7B741_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16288.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Zn-dependent hydrolases, including glyoxylases
L1_008_241G1_scaffold_13_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35897..37327
DNA (1431bp) protein (477aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EDN76302.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDN76302.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B740_RUMGN
Displaying items 1-30 of 156 in total

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