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L1_008_241G1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_15_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(373..1737)
DNA (1365bp) protein (455aa)
DNA repair protein radA n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVQ5_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA repair protein RadA
L1_008_241G1_scaffold_15_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1831..2244)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67398.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_15_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2345..4786)
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67397.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ATPases with chaperone activity, ATP-binding subunit
L1_008_241G1_scaffold_15_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4799..5167)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=4 Tax=Clostridiales RepID=A7B0M6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47340.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, GntR family
L1_008_241G1_scaffold_15_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5279..6136)
DNA (858bp) protein (286aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Diaminopimelate epimerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP11_9FIRM
diaminopimelate epimerase
L1_008_241G1_scaffold_15_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6280..7125
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67394.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L1_008_241G1_scaffold_15_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7113..8441)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNN0_9FIRM
L1_008_241G1_scaffold_15_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8431..9111)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67392.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_241G1_scaffold_15_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9132..9788)
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8C8_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phosphate uptake regulator, PhoU
L1_008_241G1_scaffold_15_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9792..10541)
DNA (750bp) protein (250aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein pstB 3 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP04_9FIRM
L1_008_241G1_scaffold_15_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10559..11419)
DNA (861bp) protein (287aa)
Phosphate ABC transporter n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVP6_9FIRM
Phosphate ABC transporter {ECO:0000313|EMBL:CCZ67389.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L1_008_241G1_scaffold_15_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11412..12305)
DNA (894bp) protein (298aa)
Phosphate ABC transporter, permease protein PstC n=4 Tax=Clostridiales RepID=A7B0L7_RUMGN
Phosphate ABC transporter {ECO:0000313|EMBL:EGN47348.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L1_008_241G1_scaffold_15_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12325..13245)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67387.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L1_008_241G1_scaffold_15_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13468..15105)
DNA (1638bp) protein (546aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8C2_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:CCZ67386.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Na/Pi-cotransporter II-like protein
L1_008_241G1_scaffold_15_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15219..15575)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67385.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
stage V sporulation protein AE
L1_008_241G1_scaffold_15_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15594..16604)
DNA (1011bp) protein (337aa)
Stage V sporulation protein AD n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVP1_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CCZ67384.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Stage V sporulation protein AD (SpoVAD).
L1_008_241G1_scaffold_15_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16762..17220
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67383.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SpoVA protein.
L1_008_241G1_scaffold_15_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17263..17760)
DNA (498bp) protein (166aa)
CobW/P47K family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UET7_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:CCZ67382.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cobalamin synthesis protein P47K
L1_008_241G1_scaffold_15_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17724..18209)
DNA (486bp) protein (162aa)
CobW/P47K family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UET7_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:CCZ67382.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
cobalamin biosynthesis protein CobW
L1_008_241G1_scaffold_15_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18227..19288)
DNA (1062bp) protein (354aa)
NADP-dependent alcohol dehydrogenase n=3 Tax=Clostridiales RepID=F7JXW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17039.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
tdh; threonine dehydrogenase-like Zn-dependent dehydrogenase
L1_008_241G1_scaffold_15_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19422..19832)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67380.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_15_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19792..20457)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67379.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Stage V sporulation protein AA.
L1_008_241G1_scaffold_15_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20447..20608)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67378.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_15_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20687..21403)
DNA (717bp) protein (239aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UET3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma-F factor
L1_008_241G1_scaffold_15_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21382..21837)
DNA (456bp) protein (152aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8B2_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CCZ67376.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_15_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21834..22154)
DNA (321bp) protein (107aa)
Anti-sigma factor antagonist n=4 Tax=Clostridiales RepID=A7B0K3_RUMGN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
anti-anti-sigma factor
L1_008_241G1_scaffold_15_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22259..23614)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67374.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_15_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23633..23770)
DNA (138bp) protein (46aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0K0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47365.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_15_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23770..25062)
DNA (1293bp) protein (431aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Bifunctional protein FolC n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UES8_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:CCZ67372.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_15_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25055..27289)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67371.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Displaying items 1-30 of 170 in total

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