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L1_008_241G1_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_53_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(353..1981)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B295_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46908.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucan 1,6-alpha-glucosidase
L1_008_241G1_scaffold_53_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1994..3748)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68453.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
glycosidase
L1_008_241G1_scaffold_53_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3761..5230)
DNA (1470bp) protein (490aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI34_9FIRM
L1_008_241G1_scaffold_53_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5261..7522)
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphorylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBB7_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L1_008_241G1_scaffold_53_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7550..9493)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68450.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
glycogen debranching protein
L1_008_241G1_scaffold_53_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9500..9700)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68449.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
pullulanase, type I
L1_008_241G1_scaffold_53_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9723..9833)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68448.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_53_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10012..11037
DNA (1026bp) protein (342aa)
Transcriptional regulators (EC:5.1.1.1)
Putative DNA-binding transcriptional regulator CytR n=2 Tax=Clostridiales RepID=A7B284_RUMGN
Putative DNA-binding transcriptional regulator CytR {ECO:0000313|EMBL:CCZ68447.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_53_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11063..11950)
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68446.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_53_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12225..12875)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TRU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68445.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_008_241G1_scaffold_53_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12914..13381)
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B279_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78351.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, MarR family
L1_008_241G1_scaffold_53_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13424..14476)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68443.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Dioxygenases related to 2-nitropropane dioxygenase
L1_008_241G1_scaffold_53_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14509..16197)
DNA (1689bp) protein (563aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI23_9FIRM
L1_008_241G1_scaffold_53_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16213..17556)
DNA (1344bp) protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Biotin carboxylase n=4 Tax=Clostridiales RepID=A7B276_RUMGN
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46925.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_008_241G1_scaffold_53_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17559..17990)
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridiales RepID=A7B275_RUMGN
L1_008_241G1_scaffold_53_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18004..18429)
DNA (426bp) protein (142aa)
Acetyl-CoA carboxylase n=4 Tax=Clostridiales RepID=F7JYG5_9FIRM
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46927.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L1_008_241G1_scaffold_53_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18440..19678)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Clostridiales RepID=A7B273_RUMGN
L1_008_241G1_scaffold_53_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19693..20433)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=3 Tax=Clostridiales RepID=F7JYG6_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ETD19316.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L1_008_241G1_scaffold_53_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20427..21347)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Clostridiales RepID=A7B271_RUMGN
L1_008_241G1_scaffold_53_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21340..22278)
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Enoyl-(Acyl-carrier-protein) reductase II n=4 Tax=Clostridiales RepID=F7JYG7_9FIRM
Enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CCZ68435.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_53_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22295..22519)
DNA (225bp) protein (75aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=A7B269_RUMGN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L1_008_241G1_scaffold_53_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22537..23499)
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRK4_9FIRM
L1_008_241G1_scaffold_53_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23625..23807)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B267_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68432.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_53_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24215..25591
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB98_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ68431.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Na+-driven multidrug efflux pump
L1_008_241G1_scaffold_53_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26316..27266)
DNA (951bp) protein (317aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRT4_9FIRM
L1_008_241G1_scaffold_53_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27250..28719)
DNA (1470bp) protein (490aa)
Beta-galactosidase large subunit n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYD6_9FIRM
Beta-galactosidase large subunit {ECO:0000313|EMBL:EGN46942.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycoside hydrolase family protein
L1_008_241G1_scaffold_53_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29177..29830)
DNA (654bp) protein (218aa)
DnaJ domain protein n=2 Tax=Clostridiales RepID=A7B258_RUMGN
DnaJ domain protein {ECO:0000313|EMBL:CCZ68428.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_008_241G1_scaffold_53_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29876..30289)
DNA (414bp) protein (138aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B257_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46944.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_53_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30403..31317)
DNA (915bp) protein (305aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B256_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46945.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_008_241G1_scaffold_53_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31343..32728)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68425.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
Displaying items 1-30 of 85 in total

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