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L1_008_241G1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_241G1_scaffold_54_1
unknown

Not on your lists

282..458
DNA (177bp) protein (59aa)

This feature has no annotations

L1_008_241G1_scaffold_54_2
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(840..1562)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6C1U1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59397.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L1_008_241G1_scaffold_54_3
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1968..3299)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHY6_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW19418.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L1_008_241G1_scaffold_54_4
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(3315..4715)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PYH5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO77164.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
domain of unknown function DUF1738
L1_008_241G1_scaffold_54_5
unknown

Not on your lists

comp(4718..4837)
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_241G1_scaffold_54_6
unknown

Not on your lists

comp(4956..5117)
DNA (162bp) protein (54aa)

This feature has no annotations

L1_008_241G1_scaffold_54_7
unknown

Not on your lists

comp(5156..5953)
DNA (798bp) protein (266aa)
transcriptional regulator
L1_008_241G1_scaffold_54_8
unknown

Not on your lists

comp(6103..6366)
DNA (264bp) protein (88aa)

This feature has no annotations

L1_008_241G1_scaffold_54_9
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6388..7596)
DNA (1209bp) protein (403aa)
Peptidase M23/M37 family protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QNX0_9FIRM
Peptidase M23/M37 family protein {ECO:0000313|EMBL:CDC34699.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_241G1_scaffold_54_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7597..9426)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2ED65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90661.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L1_008_241G1_scaffold_54_11
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9427..10035)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D2X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJR45206.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
L1_008_241G1_scaffold_54_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10243..10659)
DNA (417bp) protein (139aa)
Single-stranded DNA-binding protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFR0_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
single-strand binding protein
L1_008_241G1_scaffold_54_13
unknown

Not on your lists

comp(10652..11026)
DNA (375bp) protein (125aa)

This feature has no annotations

L1_008_241G1_scaffold_54_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11087..14737)
DNA (3651bp) protein (1217aa)
Repeat-containing protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q4Y3_9FIRM
Repeat-containing protein {ECO:0000313|EMBL:EKY22941.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
conserved repeat domain
L1_008_241G1_scaffold_54_15
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14939..15994)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR98570.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
peptidase domain-containing protein
L1_008_241G1_scaffold_54_16
unknown

Not on your lists

comp(16074..16469)
DNA (396bp) protein (132aa)

This feature has no annotations

L1_008_241G1_scaffold_54_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16476..16991)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68394.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_008_241G1_scaffold_54_18
unknown

Not on your lists

comp(17048..17278)
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_241G1_scaffold_54_19
unknown

Not on your lists

comp(17286..17402)
DNA (117bp) protein (39aa)

This feature has no annotations

L1_008_241G1_scaffold_54_20
unknown

Not on your lists

comp(17424..18434)
DNA (1011bp) protein (337aa)

This feature has no annotations

L1_008_241G1_scaffold_54_21
Endocarpon pusillum, Endocarpon, Verrucariales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(18445..19902)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Endocarpon pusillum Z07020 RepID=U1GK34_9EURO
Uncharacterized protein {ECO:0000313|EMBL:ERF72543.1}; TaxID=1263415 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Verrucariales; Verrucariaceae; Endocarpon.;" source="Endocarpon pusillum (strain Z07020 / HMAS-L-300199) (Lichen-forming; fungus).;"
L1_008_241G1_scaffold_54_22
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19919..20245)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SP84_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52049.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L1_008_241G1_scaffold_54_23
unknown

Not on your lists

comp(20259..20468)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_008_241G1_scaffold_54_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20481..21323)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7N0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR25283.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L1_008_241G1_scaffold_54_25
unknown

Not on your lists

comp(21335..21682)
DNA (348bp) protein (116aa)

This feature has no annotations

L1_008_241G1_scaffold_54_26
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21688..23631)
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00038257F8
TRAG protein {ECO:0000313|EMBL:KJR45211.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
TRAG family protein
L1_008_241G1_scaffold_54_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23615..24913)
DNA (1299bp) protein (433aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EDA1_9FIRM
endonuclease relaxase
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:ERI90686.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L1_008_241G1_scaffold_54_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24919..25224)
DNA (306bp) protein (102aa)
Mobilization protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDJ3_9CLOT
Mobilization protein {ECO:0000313|EMBL:EOR25291.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
mobilization protein
L1_008_241G1_scaffold_54_29
unknown

Not on your lists

comp(25249..25440)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_241G1_scaffold_54_30
unknown

Not on your lists

comp(25710..26096)
DNA (387bp) protein (129aa)

This feature has no annotations

Displaying items 1-30 of 96 in total

View Taxonomy